Sequenzmeldevorgang (NotificationBundleSequence)
https://demis.rki.de/fhir/StructureDefinition/NotificationBundleSequence
Der Sequenzmeldevorgang ist vom Meldevorgang abgeleitet und bildet den Container für eine Sequenzmeldung (Sequenzübermittlung) und die darin referenzierten Ressourcen.
Profilansicht
Bundle | I | Bundle | |
meta | Σ | 1..1 | Meta |
versionId | Σ | 0..1 | id |
lastUpdated | Σ | 0..1 | instant |
source | Σ | 0..1 | uri |
profile | Σ | 1..1 | canonical(http://hl7.org/fhir/StructureDefinition/StructureDefinition)Fixed Value |
security | Σ | 0..* | CodingBinding |
tag | Σ | 0..* | Coding |
identifier | S Σ | 1..1 | Identifier |
use | Σ ?! | 0..1 | codeBinding |
type | Σ | 0..1 | CodeableConceptBinding |
system | Σ | 1..1 | uriFixed Value |
value | Σ | 1..1 | string |
period | Σ I | 0..1 | Period |
assigner | Σ I | 0..1 | Reference(http://hl7.org/fhir/StructureDefinition/Organization) |
type | Σ | 1..1 | codeBindingFixed Value |
timestamp | Σ | 0..1 | instant |
total | Σ I | 0..1 | unsignedInt |
link | Σ | 0..* | BackboneElement |
relation | Σ | 1..1 | string |
url | Σ | 1..1 | uri |
entry | Σ I | 0..* | BackboneElement |
(All Slices) | |||
link | Σ | 0..* | see (link) |
fullUrl | Σ | 0..1 | uri |
resource | Σ | 0..1 | Resource |
search | Σ I | 0..1 | BackboneElement |
mode | Σ | 0..1 | codeBinding |
score | Σ | 0..1 | decimal |
request | Σ I | 0..1 | BackboneElement |
method | Σ | 1..1 | codeBinding |
url | Σ | 1..1 | uri |
ifNoneMatch | Σ | 0..1 | string |
ifModifiedSince | Σ | 0..1 | instant |
ifMatch | Σ | 0..1 | string |
ifNoneExist | Σ | 0..1 | string |
response | Σ I | 0..1 | BackboneElement |
status | Σ | 1..1 | string |
location | Σ | 0..1 | uri |
etag | Σ | 0..1 | string |
lastModified | Σ | 0..1 | instant |
outcome | Σ | 0..1 | Resource |
notification | S Σ I | 1..* | BackboneElement |
link | Σ | 0..* | see (link) |
fullUrl | Σ | 0..1 | uri |
resource | Σ | 1..1 | Sequenzmeldung |
search | Σ I | 0..1 | BackboneElement |
mode | Σ | 0..1 | codeBinding |
score | Σ | 0..1 | decimal |
request | Σ I | 0..1 | BackboneElement |
method | Σ | 1..1 | codeBinding |
url | Σ | 1..1 | uri |
ifNoneMatch | Σ | 0..1 | string |
ifModifiedSince | Σ | 0..1 | instant |
ifMatch | Σ | 0..1 | string |
ifNoneExist | Σ | 0..1 | string |
response | Σ I | 0..1 | BackboneElement |
status | Σ | 1..1 | string |
location | Σ | 0..1 | uri |
etag | Σ | 0..1 | string |
lastModified | Σ | 0..1 | instant |
outcome | Σ | 0..1 | Resource |
signature | Σ | 0..1 | Signature |
Beispiele
<Bundle xmlns="http://hl7.org/fhir"> <meta> <lastUpdated value="2023-01-14T08:16:01.000+01:00" /> <profile value="https://demis.rki.de/fhir/StructureDefinition/NotificationBundleSequence" /> </meta> <identifier> <system value="https://demis.rki.de/fhir/NamingSystem/NotificationBundleId" /> <value value="fb8d651b-3305-34b9-9e7f-a7809b62767d" /> </identifier> <type value="document" /> <timestamp value="2023-01-14T08:16:01.000+01:00" /> <entry> <fullUrl value="https://demis.rki.de/fhir/Composition/4a19589d-3ae8-3439-baea-b2e0f60a98b2" /> <resource> <Composition> <id value="4a19589d-3ae8-3439-baea-b2e0f60a98b2" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/NotificationSequence" /> </meta> <identifier> <system value="https://demis.rki.de/fhir/NamingSystem/NotificationId" /> <value value="d1c9252a-9809-4f17-bc59-16d6b2abaaae" /> </identifier> <status value="final" /> <type> <coding> <system value="http://loinc.org" /> <code value="34782-3" /> <display value="Infectious disease Note" /> </coding> </type> <category> <coding> <system value="http://loinc.org" /> <code value="11502-2" /> <display value="Laboratory report" /> </coding> </category> <subject> <reference value="Patient/3661f735-d3db-3c22-909d-3a16a7334c1d" /> </subject> <date value="2023-01-14T08:16:00.000+01:00" /> <author> <reference value="PractitionerRole/c92c9646-e0c8-3c3d-840c-33e505648a5c" /> </author> <title value="Sequenzmeldung" /> <relatesTo> <code value="appends" /> <targetReference> <type value="Composition" /> <identifier> <system value="https://demis.rki.de/fhir/NamingSystem/NotificationId" /> <value value="f8585efb-1872-4a4f-b88d-8c889e93487b" /> </identifier> </targetReference> </relatesTo> <section> <code> <coding> <system value="http://loinc.org" /> <code value="11502-2" /> <display value="Laboratory report" /> </coding> </code> <entry> <reference value="DiagnosticReport/2e24f26e-c450-301c-ac1e-da2205a69e39" /> </entry> </section> </Composition> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/Patient/3661f735-d3db-3c22-909d-3a16a7334c1d" /> <resource> <Patient> <id value="3661f735-d3db-3c22-909d-3a16a7334c1d" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/NotifiedPersonNotByName" /> </meta> <gender value="male" /> <birthDate value="1978-12" /> <address> <extension url="https://demis.rki.de/fhir/StructureDefinition/AddressUse"> <valueCoding> <system value="https://demis.rki.de/fhir/CodeSystem/addressUse" /> <code value="primary" /> </valueCoding> </extension> <postalCode value="130" /> </address> </Patient> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/PractitionerRole/c92c9646-e0c8-3c3d-840c-33e505648a5c" /> <resource> <PractitionerRole> <id value="c92c9646-e0c8-3c3d-840c-33e505648a5c" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/NotifierRole" /> </meta> <organization> <reference value="Organization/227a66a4-a2fe-34b9-ad24-55981d0d1d82" /> </organization> </PractitionerRole> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/Organization/227a66a4-a2fe-34b9-ad24-55981d0d1d82" /> <resource> <Organization> <id value="227a66a4-a2fe-34b9-ad24-55981d0d1d82" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/NotifierFacility" /> </meta> <identifier> <system value="https://demis.rki.de/fhir/NamingSystem/DemisLaboratoryId" /> <value value="10285" /> </identifier> <type> <coding> <system value="https://demis.rki.de/fhir/CodeSystem/organizationType" /> <code value="refLab" /> <display value="Einrichtung der Spezialdiagnostik" /> </coding> </type> <name value="Nationales Referenzzentrum für Influenza, FG17, RKI" /> <telecom> <system value="email" /> <value value="NRZ-Influenza@rki.de" /> <use value="work" /> </telecom> <address> <line value="Seestr. 10" /> <city value="Berlin" /> <postalCode value="13353" /> <country value="20422" /> </address> </Organization> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/PractitionerRole/d1b92d45-3811-3064-bad7-b3336e70e08c" /> <resource> <PractitionerRole> <id value="d1b92d45-3811-3064-bad7-b3336e70e08c" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/SubmittingRole" /> </meta> <organization> <reference value="Organization/a42f380e-b23a-3f50-a096-26665a6e4257" /> </organization> </PractitionerRole> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/Organization/a42f380e-b23a-3f50-a096-26665a6e4257" /> <resource> <Organization> <id value="a42f380e-b23a-3f50-a096-26665a6e4257" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/SubmittingFacility" /> </meta> <identifier> <system value="https://fhir.kbv.de/NamingSystem/KBV_NS_Base_BSNR" /> <value value="987654321" /> </identifier> <name value="Primärlabor" /> <telecom> <system value="phone" /> <value value="03098765410" /> <use value="work" /> </telecom> <telecom> <system value="fax" /> <value value="03098765411" /> <use value="work" /> </telecom> <telecom> <system value="email" /> <value value="ifsg@primaerlabor-gibt-es-nicht.de" /> <use value="work" /> </telecom> <telecom> <system value="url" /> <value value="http://primaerlabor-gibt-es-nicht.de" /> <use value="work" /> </telecom> <address> <line value="Dingsweg 321" /> <city value="Berlin" /> <postalCode value="13055" /> <country value="20422" /> </address> <contact> <name> <use value="official" /> <family value="Kontakt" /> <given value="Caroline" /> </name> </contact> </Organization> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/DiagnosticReport/2e24f26e-c450-301c-ac1e-da2205a69e39" /> <resource> <DiagnosticReport> <id value="2e24f26e-c450-301c-ac1e-da2205a69e39" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/LaboratoryReportSequence" /> </meta> <status value="final" /> <code> <coding> <system value="https://demis.rki.de/fhir/CodeSystem/notificationCategory" /> <code value="cvdp" /> <display value="Severe-Acute-Respiratory-Syndrome-Coronavirus-2 (SARS-CoV-2)" /> </coding> </code> <subject> <reference value="Patient/3661f735-d3db-3c22-909d-3a16a7334c1d" /> </subject> <issued value="2023-01-14T08:15:00.000+01:00" /> <result> <reference value="Observation/30aefd63-f71c-39b2-9191-8c162310c9c2" /> </result> <conclusion value="NACHWEIS eines meldepflichtigen Erregers" /> <conclusionCode> <coding> <system value="https://demis.rki.de/fhir/CodeSystem/conclusionCode" /> <code value="pathogenDetected" /> <display value="Meldepflichtiger Erreger nachgewiesen" /> </coding> </conclusionCode> </DiagnosticReport> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/Observation/30aefd63-f71c-39b2-9191-8c162310c9c2" /> <resource> <Observation> <id value="30aefd63-f71c-39b2-9191-8c162310c9c2" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/PathogenDetectionSequence" /> </meta> <status value="final" /> <category> <coding> <system value="http://terminology.hl7.org/CodeSystem/observation-category" /> <code value="laboratory" /> </coding> </category> <code> <coding> <system value="http://loinc.org" /> <code value="96741-4" /> <display value="SARS-CoV-2 (COVID-19) variant Sequencing Nom (Specimen)" /> </coding> </code> <subject> <reference value="Patient/3661f735-d3db-3c22-909d-3a16a7334c1d" /> </subject> <valueString value="BA.5.1.28" /> <interpretation> <coding> <system value="http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation" /> <code value="POS" /> </coding> </interpretation> <method> <coding> <system value="http://snomed.info/sct" /> <code value="117040002" /> <display value="Nucleic acid sequencing (procedure)" /> </coding> </method> <specimen> <reference value="Specimen/43b3b82f-656f-3e3d-a510-0109771c9e97" /> </specimen> <device> <reference value="Device/b075aba8-edcb-38f7-973a-6ba64b240a3e" /> </device> <derivedFrom> <reference value="MolecularSequence/26038f18-8c2d-3ad7-90e6-f52cfd779262" /> </derivedFrom> </Observation> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/Specimen/43b3b82f-656f-3e3d-a510-0109771c9e97" /> <resource> <Specimen> <id value="43b3b82f-656f-3e3d-a510-0109771c9e97" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/SpecimenSequence" /> </meta> <status value="available" /> <type> <coding> <system value="http://snomed.info/sct" /> <code value="258604001" /> <display value="Upper respiratory specimen (specimen)" /> </coding> </type> <subject> <reference value="Patient/3661f735-d3db-3c22-909d-3a16a7334c1d" /> </subject> <receivedTime value="2022-12-29T15:40:00.000+01:00" /> <collection> <collector> <reference value="PractitionerRole/d1b92d45-3811-3064-bad7-b3336e70e08c" /> </collector> <collectedDateTime value="2022-12-29T09:50:00.000+01:00" /> </collection> <processing> <description value="ARTICv4" /> <procedure> <coding> <system value="https://demis.rki.de/fhir/CodeSystem/sequencingStrategy" /> <code value="amplicon" /> </coding> </procedure> <timeDateTime value="2023-01-13T10:40:00.000+01:00" /> </processing> </Specimen> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/Device/b075aba8-edcb-38f7-973a-6ba64b240a3e" /> <resource> <Device> <id value="b075aba8-edcb-38f7-973a-6ba64b240a3e" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/SequencingDevice" /> </meta> <deviceName> <name value="GridION" /> <type value="model-name" /> </deviceName> <type> <coding> <system value="https://demis.rki.de/fhir/CodeSystem/sequencingPlatform" /> <code value="oxford_nanopore" /> <display value="Oxford Nanopore platform type. nanopore-based electronic single molecule analysis." /> </coding> </type> </Device> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/MolecularSequence/26038f18-8c2d-3ad7-90e6-f52cfd779262" /> <resource> <MolecularSequence> <id value="26038f18-8c2d-3ad7-90e6-f52cfd779262" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/Sequence" /> </meta> <extension url="https://demis.rki.de/fhir/StructureDefinition/SequenceAuthor"> <valueString value="Ralf Dürrwald, Stephan Fuchs, Stefan Kroeger, Marianne Wedde, Oliver Drechsel, Aleksandar Radonic, Rene Kmiecinski, Thorsten Wolff" /> </extension> <extension url="https://demis.rki.de/fhir/StructureDefinition/SequencingReason"> <valueCoding> <system value="http://snomed.info/sct" /> <code value="255226008" /> <display value="Random (qualifier value)" /> </valueCoding> </extension> <extension url="https://demis.rki.de/fhir/StructureDefinition/SequenceDocumentReference"> <valueReference> <reference value="https://demis.rki.de/fhir/DocumentReference/ecd3f1f0-b6b6-46e0-b721-2d9869ab8195" /> <type value="DocumentReference" /> </valueReference> </extension> <identifier> <value value="A384" /> </identifier> <type value="dna" /> <coordinateSystem value="0" /> <specimen> <reference value="Specimen/43b3b82f-656f-3e3d-a510-0109771c9e97" /> </specimen> <device> <reference value="Device/b075aba8-edcb-38f7-973a-6ba64b240a3e" /> </device> <performer> <reference value="Organization/227a66a4-a2fe-34b9-ad24-55981d0d1d82" /> </performer> <repository> <extension url="https://demis.rki.de/fhir/StructureDefinition/SequenceUploadDate"> <valueDateTime value="2023-02-10" /> </extension> <extension url="https://demis.rki.de/fhir/StructureDefinition/SequenceUploadSubmitter"> <valueString value="O Drechsel" /> </extension> <extension url="https://demis.rki.de/fhir/StructureDefinition/SequenceUploadStatus"> <valueCoding> <system value="http://snomed.info/sct" /> <code value="385645004" /> </valueCoding> </extension> <type value="other" /> <name value="gisaid" /> <datasetId value="EPI_ISL_16883504" /> </repository> </MolecularSequence> </resource> </entry> </Bundle>
<Bundle xmlns="http://hl7.org/fhir"> <meta> <lastUpdated value="2022-10-23T10:16:01.000+01:00" /> <profile value="https://demis.rki.de/fhir/StructureDefinition/NotificationBundleSequence" /> </meta> <identifier> <system value="https://demis.rki.de/fhir/NamingSystem/NotificationBundleId" /> <value value="1340e888-09fc-307e-8cf7-89a82a2da82f" /> </identifier> <type value="document" /> <timestamp value="2022-10-23T10:16:01.000+01:00" /> <entry> <fullUrl value="https://demis.rki.de/fhir/Composition/75d18444-d984-339c-b748-45bed5036792" /> <resource> <Composition> <id value="75d18444-d984-339c-b748-45bed5036792" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/NotificationSequence" /> </meta> <identifier> <system value="https://demis.rki.de/fhir/NamingSystem/NotificationId" /> <value value="2e7e9312-5252-4b5d-bdd0-16c0119f6d54" /> </identifier> <status value="final" /> <type> <coding> <system value="http://loinc.org" /> <code value="34782-3" /> <display value="Infectious disease Note" /> </coding> </type> <category> <coding> <system value="http://loinc.org" /> <code value="11502-2" /> <display value="Laboratory report" /> </coding> </category> <subject> <reference value="Patient/bc6fd419-e020-3294-90a5-4975bb0a2d92" /> </subject> <date value="2022-10-23T10:16:00.000+01:00" /> <author> <reference value="PractitionerRole/2cbbb5e7-8c23-353b-92bf-6e155d129a72" /> </author> <title value="Sequenzmeldung" /> <relatesTo> <code value="appends" /> <targetReference> <type value="Composition" /> <identifier> <system value="https://demis.rki.de/fhir/NamingSystem/NotificationId" /> <value value="a26de91b-1911-4e32-a9f4-6778e65dc122" /> </identifier> </targetReference> </relatesTo> <section> <code> <coding> <system value="http://loinc.org" /> <code value="11502-2" /> <display value="Laboratory report" /> </coding> </code> <entry> <reference value="DiagnosticReport/afecda26-7a3d-3f9d-8870-5d7657472cd6" /> </entry> </section> </Composition> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/Patient/bc6fd419-e020-3294-90a5-4975bb0a2d92" /> <resource> <Patient> <id value="bc6fd419-e020-3294-90a5-4975bb0a2d92" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/NotifiedPersonNotByName" /> </meta> <gender value="female" /> <birthDate value="2011-01" /> <address> <extension url="https://demis.rki.de/fhir/StructureDefinition/AddressUse"> <valueCoding> <system value="https://demis.rki.de/fhir/CodeSystem/addressUse" /> <code value="primary" /> </valueCoding> </extension> <postalCode value="123" /> </address> </Patient> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/PractitionerRole/2cbbb5e7-8c23-353b-92bf-6e155d129a72" /> <resource> <PractitionerRole> <id value="2cbbb5e7-8c23-353b-92bf-6e155d129a72" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/NotifierRole" /> </meta> <organization> <reference value="Organization/08c4e143-1125-3f11-a1d5-1586fc5e2e31" /> </organization> </PractitionerRole> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/Organization/08c4e143-1125-3f11-a1d5-1586fc5e2e31" /> <resource> <Organization> <id value="08c4e143-1125-3f11-a1d5-1586fc5e2e31" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/NotifierFacility" /> </meta> <identifier> <system value="https://demis.rki.de/fhir/NamingSystem/DemisLaboratoryId" /> <value value="10565" /> </identifier> <type> <coding> <system value="https://demis.rki.de/fhir/CodeSystem/organizationType" /> <code value="refLab" /> <display value="Einrichtung der Spezialdiagnostik" /> </coding> </type> <name value="Forschungszentrum Borstel" /> <telecom> <system value="phone" /> <value value="+49 (0) 4537 / 188-0" /> <use value="work" /> </telecom> <address> <line value="Parkallee 1" /> <city value="Borstel" /> <postalCode value="23845" /> <country value="20422" /> </address> </Organization> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/PractitionerRole/c9749945-7b6e-39a6-a117-422d4661bb3a" /> <resource> <PractitionerRole> <id value="c9749945-7b6e-39a6-a117-422d4661bb3a" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/SubmittingRole" /> </meta> <organization> <reference value="Organization/0541e1b6-228d-352c-a025-0a17e1463d76" /> </organization> </PractitionerRole> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/Organization/0541e1b6-228d-352c-a025-0a17e1463d76" /> <resource> <Organization> <id value="0541e1b6-228d-352c-a025-0a17e1463d76" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/SubmittingFacility" /> </meta> <identifier> <system value="https://demis.rki.de/fhir/NamingSystem/DemisLaboratoryId" /> <value value="10116" /> </identifier> <name value="Labor Dr. Limbach & Kollegen GbR" /> <telecom> <system value="email" /> <value value="info@labor-limbach.de" /> <use value="work" /> </telecom> <address> <line value="Im Breitspiel 16" /> <city value="Heidelberg" /> <postalCode value="69126" /> <country value="20422" /> </address> </Organization> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/DiagnosticReport/afecda26-7a3d-3f9d-8870-5d7657472cd6" /> <resource> <DiagnosticReport> <id value="afecda26-7a3d-3f9d-8870-5d7657472cd6" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/LaboratoryReportSequence" /> </meta> <status value="final" /> <code> <coding> <system value="https://demis.rki.de/fhir/CodeSystem/notificationCategory" /> <code value="mytp" /> <display value="Mycobacterium tuberculosis, Mycobacterium africanum, Mycobacterium bovis; Meldepflicht für den direkten Erregernachweis sowie nachfolgend für das Ergebnis der Resistenzbestimmung; vorab auch für den Nachweis säurefester Stäbchen im Sputum" /> </coding> </code> <subject> <reference value="Patient/bc6fd419-e020-3294-90a5-4975bb0a2d92" /> </subject> <issued value="2022-10-23T10:15:00.000+01:00" /> <result> <reference value="Observation/5ee10ec4-a754-314c-9886-5b17d6d48457" /> </result> <conclusion value="NACHWEIS eines meldepflichtigen Erregers" /> <conclusionCode> <coding> <system value="https://demis.rki.de/fhir/CodeSystem/conclusionCode" /> <code value="pathogenDetected" /> <display value="Meldepflichtiger Erreger nachgewiesen" /> </coding> </conclusionCode> </DiagnosticReport> </resource> </entry> <entry> <fullUrl value="https://demis.rki.de/fhir/Observation/5ee10ec4-a754-314c-9886-5b17d6d48457" /> <resource> <Observation> <id value="5ee10ec4-a754-314c-9886-5b17d6d48457" /> <meta> <profile value="https://demis.rki.de/fhir/StructureDefinition/PathogenDetectionSequence" /> </meta> <status value="final" /> <category> <coding> <system value="http://terminology.hl7.org/CodeSystem/observation-category" /> <code value="laboratory" /> </coding> </category> <code> <coding> <system value="http://loinc.org" /> <code 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