Sequenzmeldevorgang (NotificationBundleSequence)

https://demis.rki.de/fhir/StructureDefinition/NotificationBundleSequence

Der Sequenzmeldevorgang ist vom Meldevorgang abgeleitet und bildet den Container für eine Sequenzmeldung (Sequenzübermittlung) und die darin referenzierten Ressourcen.

Profilansicht

idΣ0..1string
id0..1string
extensionI0..*Extension
versionIdΣ0..1id
lastUpdatedΣ0..1instant
sourceΣ0..1uri
profileS Σ1..1canonical(StructureDefinition)Fixed Value
securityΣ0..*CodingBinding
tagΣ0..*Coding
implicitRulesΣ ?!0..1uri
language0..1codeBinding
id0..1string
extensionI0..*Extension
useΣ ?!0..1codeBinding
typeΣ0..1CodeableConceptBinding
systemS Σ1..1uri
valueS Σ1..1string
periodΣ I0..1Period
assignerΣ I0..1Reference(Organization)
typeS Σ1..1codeBindingFixed Value
timestampΣ0..1instant
totalΣ I0..1unsignedInt
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
relationΣ1..1string
urlΣ1..1uri
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
fullUrlΣ0..1uri
resourceΣ0..1Resource
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
modeΣ0..1codeBinding
scoreΣ0..1decimal
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
methodΣ1..1codeBinding
urlΣ1..1uri
ifNoneMatchΣ0..1string
ifModifiedSinceΣ0..1instant
ifMatchΣ0..1string
ifNoneExistΣ0..1string
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
statusΣ1..1string
locationΣ0..1uri
etagΣ0..1string
lastModifiedΣ0..1instant
outcomeΣ0..1Resource
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
fullUrlΣ0..1uri
resourceS Σ I1..1Sequenzmeldung
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
modeΣ0..1codeBinding
scoreΣ0..1decimal
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
methodΣ1..1codeBinding
urlΣ1..1uri
ifNoneMatchΣ0..1string
ifModifiedSinceΣ0..1instant
ifMatchΣ0..1string
ifNoneExistΣ0..1string
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
statusΣ1..1string
locationΣ0..1uri
etagΣ0..1string
lastModifiedΣ0..1instant
outcomeΣ0..1Resource
signatureΣ0..1Signature

Beispiele

<Bundle xmlns="http://hl7.org/fhir">
    <meta>
        <lastUpdated value="2023-01-14T08:16:01.000+01:00" />
        <profile value="https://demis.rki.de/fhir/StructureDefinition/NotificationBundleSequence" />
    </meta>
    <identifier>
        <system value="https://demis.rki.de/fhir/NamingSystem/NotificationBundleId" />
        <value value="fb8d651b-3305-34b9-9e7f-a7809b62767d" />
    </identifier>
    <type value="document" />
    <timestamp value="2023-01-14T08:16:01.000+01:00" />
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/Composition/4a19589d-3ae8-3439-baea-b2e0f60a98b2" />
        <resource>
            <Composition>
                <id value="4a19589d-3ae8-3439-baea-b2e0f60a98b2" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/NotificationSequence" />
                </meta>
                <identifier>
                    <system value="https://demis.rki.de/fhir/NamingSystem/NotificationId" />
                    <value value="d1c9252a-9809-4f17-bc59-16d6b2abaaae" />
                </identifier>
                <status value="final" />
                <type>
                    <coding>
                        <system value="http://loinc.org" />
                        <code value="34782-3" />
                        <display value="Infectious disease Note" />
                    </coding>
                </type>
                <category>
                    <coding>
                        <system value="http://loinc.org" />
                        <code value="11502-2" />
                        <display value="Laboratory report" />
                    </coding>
                </category>
                <subject>
                    <reference value="Patient/3661f735-d3db-3c22-909d-3a16a7334c1d" />
                </subject>
                <date value="2023-01-14T08:16:00.000+01:00" />
                <author>
                    <reference value="PractitionerRole/c92c9646-e0c8-3c3d-840c-33e505648a5c" />
                </author>
                <title value="Sequenzmeldung" />
                <relatesTo>
                    <code value="appends" />
                    <targetReference>
                        <type value="Composition" />
                        <identifier>
                            <system value="https://demis.rki.de/fhir/NamingSystem/NotificationId" />
                            <value value="f8585efb-1872-4a4f-b88d-8c889e93487b" />
                        </identifier>
                    </targetReference>
                </relatesTo>
                <section>
                    <code>
                        <coding>
                            <system value="http://loinc.org" />
                            <code value="11502-2" />
                            <display value="Laboratory report" />
                        </coding>
                    </code>
                    <entry>
                        <reference value="DiagnosticReport/2e24f26e-c450-301c-ac1e-da2205a69e39" />
                    </entry>
                </section>
            </Composition>
        </resource>
    </entry>
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/Patient/3661f735-d3db-3c22-909d-3a16a7334c1d" />
        <resource>
            <Patient>
                <id value="3661f735-d3db-3c22-909d-3a16a7334c1d" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/NotifiedPersonNotByName" />
                </meta>
                <gender value="male" />
                <birthDate value="1978-12" />
                <address>
                    <extension url="https://demis.rki.de/fhir/StructureDefinition/AddressUse">
                        <valueCoding>
                            <system value="https://demis.rki.de/fhir/CodeSystem/addressUse" />
                            <code value="primary" />
                        </valueCoding>
                    </extension>
                    <postalCode value="130" />
                </address>
            </Patient>
        </resource>
    </entry>
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/PractitionerRole/c92c9646-e0c8-3c3d-840c-33e505648a5c" />
        <resource>
            <PractitionerRole>
                <id value="c92c9646-e0c8-3c3d-840c-33e505648a5c" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/NotifierRole" />
                </meta>
                <organization>
                    <reference value="Organization/227a66a4-a2fe-34b9-ad24-55981d0d1d82" />
                </organization>
            </PractitionerRole>
        </resource>
    </entry>
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/Organization/227a66a4-a2fe-34b9-ad24-55981d0d1d82" />
        <resource>
            <Organization>
                <id value="227a66a4-a2fe-34b9-ad24-55981d0d1d82" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/NotifierFacility" />
                </meta>
                <identifier>
                    <system value="https://demis.rki.de/fhir/NamingSystem/DemisLaboratoryId" />
                    <value value="10285" />
                </identifier>
                <type>
                    <coding>
                        <system value="https://demis.rki.de/fhir/CodeSystem/organizationType" />
                        <code value="refLab" />
                        <display value="Einrichtung der Spezialdiagnostik" />
                    </coding>
                </type>
                <name value="Nationales Referenzzentrum f&#252;r Influenza, FG17, RKI" />
                <telecom>
                    <system value="email" />
                    <value value="NRZ-Influenza@rki.de" />
                    <use value="work" />
                </telecom>
                <address>
                    <line value="Seestr. 10" />
                    <city value="Berlin" />
                    <postalCode value="13353" />
                    <country value="DE" />
                </address>
            </Organization>
        </resource>
    </entry>
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/PractitionerRole/d1b92d45-3811-3064-bad7-b3336e70e08c" />
        <resource>
            <PractitionerRole>
                <id value="d1b92d45-3811-3064-bad7-b3336e70e08c" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/SubmittingRole" />
                </meta>
                <organization>
                    <reference value="Organization/a42f380e-b23a-3f50-a096-26665a6e4257" />
                </organization>
            </PractitionerRole>
        </resource>
    </entry>
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/Organization/a42f380e-b23a-3f50-a096-26665a6e4257" />
        <resource>
            <Organization>
                <id value="a42f380e-b23a-3f50-a096-26665a6e4257" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/SubmittingFacility" />
                </meta>
                <identifier>
                    <system value="https://fhir.kbv.de/NamingSystem/KBV_NS_Base_BSNR" />
                    <value value="987654321" />
                </identifier>
                <name value="Prim&#228;rlabor" />
                <telecom>
                    <system value="phone" />
                    <value value="03098765410" />
                    <use value="work" />
                </telecom>
                <telecom>
                    <system value="fax" />
                    <value value="03098765411" />
                    <use value="work" />
                </telecom>
                <telecom>
                    <system value="email" />
                    <value value="ifsg@primaerlabor-gibt-es-nicht.de" />
                    <use value="work" />
                </telecom>
                <telecom>
                    <system value="url" />
                    <value value="http://primaerlabor-gibt-es-nicht.de" />
                    <use value="work" />
                </telecom>
                <address>
                    <line value="Dingsweg 321" />
                    <city value="Berlin" />
                    <postalCode value="13055" />
                    <country value="DE" />
                </address>
                <contact>
                    <name>
                        <use value="official" />
                        <family value="Kontakt" />
                        <given value="Caroline" />
                    </name>
                </contact>
            </Organization>
        </resource>
    </entry>
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/DiagnosticReport/2e24f26e-c450-301c-ac1e-da2205a69e39" />
        <resource>
            <DiagnosticReport>
                <id value="2e24f26e-c450-301c-ac1e-da2205a69e39" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/LaboratoryReportSequence" />
                </meta>
                <status value="final" />
                <code>
                    <coding>
                        <system value="https://demis.rki.de/fhir/CodeSystem/notificationCategory" />
                        <code value="cvdp" />
                        <display value="Severe-Acute-Respiratory-Syndrome-Coronavirus-2 (SARS-CoV-2)" />
                    </coding>
                </code>
                <subject>
                    <reference value="Patient/3661f735-d3db-3c22-909d-3a16a7334c1d" />
                </subject>
                <issued value="2023-01-14T08:15:00.000+01:00" />
                <result>
                    <reference value="Observation/30aefd63-f71c-39b2-9191-8c162310c9c2" />
                </result>
                <conclusion value="NACHWEIS eines meldepflichtigen Erregers" />
                <conclusionCode>
                    <coding>
                        <system value="https://demis.rki.de/fhir/CodeSystem/conclusionCode" />
                        <code value="pathogenDetected" />
                        <display value="Meldepflichtiger Erreger nachgewiesen" />
                    </coding>
                </conclusionCode>
            </DiagnosticReport>
        </resource>
    </entry>
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/Observation/30aefd63-f71c-39b2-9191-8c162310c9c2" />
        <resource>
            <Observation>
                <id value="30aefd63-f71c-39b2-9191-8c162310c9c2" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/PathogenDetectionSequence" />
                </meta>
                <status value="final" />
                <category>
                    <coding>
                        <system value="http://terminology.hl7.org/CodeSystem/observation-category" />
                        <code value="laboratory" />
                    </coding>
                </category>
                <code>
                    <coding>
                        <system value="http://loinc.org" />
                        <code value="96741-4" />
                        <display value="SARS-CoV-2 (COVID-19) variant Sequencing Nom (Specimen)" />
                    </coding>
                </code>
                <subject>
                    <reference value="Patient/3661f735-d3db-3c22-909d-3a16a7334c1d" />
                </subject>
                <valueString value="BA.5.1.28" />
                <interpretation>
                    <coding>
                        <system value="http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation" />
                        <code value="POS" />
                    </coding>
                </interpretation>
                <method>
                    <coding>
                        <system value="http://snomed.info/sct" />
                        <code value="117040002" />
                        <display value="Nucleic acid sequencing (procedure)" />
                    </coding>
                </method>
                <specimen>
                    <reference value="Specimen/43b3b82f-656f-3e3d-a510-0109771c9e97" />
                </specimen>
                <device>
                    <reference value="Device/b075aba8-edcb-38f7-973a-6ba64b240a3e" />
                </device>
                <derivedFrom>
                    <reference value="MolecularSequence/26038f18-8c2d-3ad7-90e6-f52cfd779262" />
                </derivedFrom>
            </Observation>
        </resource>
    </entry>
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/Specimen/43b3b82f-656f-3e3d-a510-0109771c9e97" />
        <resource>
            <Specimen>
                <id value="43b3b82f-656f-3e3d-a510-0109771c9e97" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/SpecimenSequence" />
                </meta>
                <status value="available" />
                <type>
                    <coding>
                        <system value="http://snomed.info/sct" />
                        <code value="258604001" />
                        <display value="Upper respiratory specimen (specimen)" />
                    </coding>
                </type>
                <subject>
                    <reference value="Patient/3661f735-d3db-3c22-909d-3a16a7334c1d" />
                </subject>
                <receivedTime value="2022-12-29T15:40:00.000+01:00" />
                <collection>
                    <collector>
                        <reference value="PractitionerRole/d1b92d45-3811-3064-bad7-b3336e70e08c" />
                    </collector>
                    <collectedDateTime value="2022-12-29T09:50:00.000+01:00" />
                </collection>
                <processing>
                    <description value="ARTICv4" />
                    <procedure>
                        <coding>
                            <system value="https://demis.rki.de/fhir/CodeSystem/sequencingStrategy" />
                            <code value="amplicon" />
                        </coding>
                    </procedure>
                    <timeDateTime value="2023-01-13T10:40:00.000+01:00" />
                </processing>
            </Specimen>
        </resource>
    </entry>
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/Device/b075aba8-edcb-38f7-973a-6ba64b240a3e" />
        <resource>
            <Device>
                <id value="b075aba8-edcb-38f7-973a-6ba64b240a3e" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/SequencingDevice" />
                </meta>
                <deviceName>
                    <name value="GridION" />
                    <type value="model-name" />
                </deviceName>
                <type>
                    <coding>
                        <system value="https://demis.rki.de/fhir/CodeSystem/sequencingPlatform" />
                        <code value="oxford_nanopore" />
                        <display value="Oxford Nanopore platform type. nanopore-based electronic single molecule analysis." />
                    </coding>
                </type>
            </Device>
        </resource>
    </entry>
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/MolecularSequence/26038f18-8c2d-3ad7-90e6-f52cfd779262" />
        <resource>
            <MolecularSequence>
                <id value="26038f18-8c2d-3ad7-90e6-f52cfd779262" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/Sequence" />
                </meta>
                <extension url="https://demis.rki.de/fhir/StructureDefinition/SequenceAuthor">
                    <valueString value="Ralf D&#252;rrwald, Stephan Fuchs, Stefan Kroeger, Marianne Wedde, Oliver Drechsel, Aleksandar Radonic, Rene Kmiecinski, Thorsten Wolff" />
                </extension>
                <extension url="https://demis.rki.de/fhir/StructureDefinition/SequencingReason">
                    <valueCoding>
                        <system value="http://snomed.info/sct" />
                        <code value="255226008" />
                        <display value="Random (qualifier value)" />
                    </valueCoding>
                </extension>
                <extension url="https://demis.rki.de/fhir/StructureDefinition/SequenceDocumentReference">
                    <valueReference>
                        <reference value="https://demis.rki.de/fhir/DocumentReference/ecd3f1f0-b6b6-46e0-b721-2d9869ab8195" />
                        <type value="DocumentReference" />
                    </valueReference>
                </extension>
                <identifier>
                    <value value="A384" />
                </identifier>
                <type value="dna" />
                <coordinateSystem value="0" />
                <specimen>
                    <reference value="Specimen/43b3b82f-656f-3e3d-a510-0109771c9e97" />
                </specimen>
                <device>
                    <reference value="Device/b075aba8-edcb-38f7-973a-6ba64b240a3e" />
                </device>
                <performer>
                    <reference value="Organization/227a66a4-a2fe-34b9-ad24-55981d0d1d82" />
                </performer>
                <repository>
                    <extension url="https://demis.rki.de/fhir/StructureDefinition/SequenceUploadDate">
                        <valueDateTime value="2023-02-10" />
                    </extension>
                    <extension url="https://demis.rki.de/fhir/StructureDefinition/SequenceUploadSubmitter">
                        <valueString value="O Drechsel" />
                    </extension>
                    <extension url="https://demis.rki.de/fhir/StructureDefinition/SequenceUploadStatus">
                        <valueCoding>
                            <system value="http://snomed.info/sct" />
                            <code value="385645004" />
                        </valueCoding>
                    </extension>
                    <type value="other" />
                    <name value="gisaid" />
                    <datasetId value="EPI_ISL_16883504" />
                </repository>
            </MolecularSequence>
        </resource>
    </entry>
</Bundle>
<Bundle xmlns="http://hl7.org/fhir">
    <meta>
        <lastUpdated value="2022-10-23T10:16:01.000+01:00" />
        <profile value="https://demis.rki.de/fhir/StructureDefinition/NotificationBundleSequence" />
    </meta>
    <identifier>
        <system value="https://demis.rki.de/fhir/NamingSystem/NotificationBundleId" />
        <value value="1340e888-09fc-307e-8cf7-89a82a2da82f" />
    </identifier>
    <type value="document" />
    <timestamp value="2022-10-23T10:16:01.000+01:00" />
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/Composition/75d18444-d984-339c-b748-45bed5036792" />
        <resource>
            <Composition>
                <id value="75d18444-d984-339c-b748-45bed5036792" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/NotificationSequence" />
                </meta>
                <identifier>
                    <system value="https://demis.rki.de/fhir/NamingSystem/NotificationId" />
                    <value value="2e7e9312-5252-4b5d-bdd0-16c0119f6d54" />
                </identifier>
                <status value="final" />
                <type>
                    <coding>
                        <system value="http://loinc.org" />
                        <code value="34782-3" />
                        <display value="Infectious disease Note" />
                    </coding>
                </type>
                <category>
                    <coding>
                        <system value="http://loinc.org" />
                        <code value="11502-2" />
                        <display value="Laboratory report" />
                    </coding>
                </category>
                <subject>
                    <reference value="Patient/bc6fd419-e020-3294-90a5-4975bb0a2d92" />
                </subject>
                <date value="2022-10-23T10:16:00.000+01:00" />
                <author>
                    <reference value="PractitionerRole/2cbbb5e7-8c23-353b-92bf-6e155d129a72" />
                </author>
                <title value="Sequenzmeldung" />
                <relatesTo>
                    <code value="appends" />
                    <targetReference>
                        <type value="Composition" />
                        <identifier>
                            <system value="https://demis.rki.de/fhir/NamingSystem/NotificationId" />
                            <value value="a26de91b-1911-4e32-a9f4-6778e65dc122" />
                        </identifier>
                    </targetReference>
                </relatesTo>
                <section>
                    <code>
                        <coding>
                            <system value="http://loinc.org" />
                            <code value="11502-2" />
                            <display value="Laboratory report" />
                        </coding>
                    </code>
                    <entry>
                        <reference value="DiagnosticReport/afecda26-7a3d-3f9d-8870-5d7657472cd6" />
                    </entry>
                </section>
            </Composition>
        </resource>
    </entry>
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/Patient/bc6fd419-e020-3294-90a5-4975bb0a2d92" />
        <resource>
            <Patient>
                <id value="bc6fd419-e020-3294-90a5-4975bb0a2d92" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/NotifiedPersonNotByName" />
                </meta>
                <gender value="female" />
                <birthDate value="2011-01" />
                <address>
                    <extension url="https://demis.rki.de/fhir/StructureDefinition/AddressUse">
                        <valueCoding>
                            <system value="https://demis.rki.de/fhir/CodeSystem/addressUse" />
                            <code value="primary" />
                        </valueCoding>
                    </extension>
                    <postalCode value="123" />
                </address>
            </Patient>
        </resource>
    </entry>
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/PractitionerRole/2cbbb5e7-8c23-353b-92bf-6e155d129a72" />
        <resource>
            <PractitionerRole>
                <id value="2cbbb5e7-8c23-353b-92bf-6e155d129a72" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/NotifierRole" />
                </meta>
                <organization>
                    <reference value="Organization/08c4e143-1125-3f11-a1d5-1586fc5e2e31" />
                </organization>
            </PractitionerRole>
        </resource>
    </entry>
    <entry>
        <fullUrl value="https://demis.rki.de/fhir/Organization/08c4e143-1125-3f11-a1d5-1586fc5e2e31" />
        <resource>
            <Organization>
                <id value="08c4e143-1125-3f11-a1d5-1586fc5e2e31" />
                <meta>
                    <profile value="https://demis.rki.de/fhir/StructureDefinition/NotifierFacility" />
                </meta>
                <identifier>
                    <system value="https://demis.rki.de/fhir/NamingSystem/DemisLaboratoryId" />
                    <value value="10565" />
                </identifier>
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