Sequenz-Dokument (SequenceDocument)

https://demis.rki.de/fhir/StructureDefinition/SequenceDocument

Das SequenceDocument referenziert die Sequenzdaten im FASTA- oder FASTQ-Format.

Profilansicht

idΣ0..1string
id0..1string
extensionI0..*Extension
versionIdΣ0..1id
lastUpdatedΣ0..1instant
sourceΣ0..1uri
profileS Σ1..1canonical(StructureDefinition)Fixed Value
securityΣ0..*CodingBinding
tagΣ0..*Coding
implicitRulesΣ ?!0..1uri
language0..1codeBinding
text0..1Narrative
contained0..*Resource
extensionI0..*Extension
modifierExtension?! I0..*Extension
masterIdentifierΣ0..1Identifier
identifierΣ0..*Identifier
statusΣ ?!1..1codeBinding
docStatusΣ0..1codeBinding
id0..1string
extensionI0..*Extension
codingS Σ1..1CodingPattern
textΣ0..1string
categoryΣ0..*CodeableConcept
subjectΣ I0..1Reference(Patient | Practitioner | Group | Device)
dateΣ0..1instant
authorΣ I0..*Reference(Practitioner | PractitionerRole | Organization | Device | Patient | RelatedPerson)
authenticatorI0..1Reference(Practitioner | PractitionerRole | Organization)
custodianI0..1Reference(Organization)
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
codeΣ1..1codeBinding
targetΣ I1..1Reference(DocumentReference)
descriptionΣ0..1string
securityLabelΣ0..*CodeableConceptBinding
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
id0..1string
extensionI0..*Extension
contentTypeS Σ1..1codeBinding
languageΣ0..1codeBinding
data0..0base64Binary
urlΣ0..1url
sizeΣ0..1unsignedInt
hashΣ0..1base64Binary
titleS Σ1..1string
creationΣ0..1dateTime
formatΣ0..1CodingBinding
id0..1string
extensionI0..*Extension
modifierExtensionΣ ?! I0..*Extension
encounterI0..*Reference(Encounter | EpisodeOfCare)
event0..*CodeableConcept
periodΣ I0..1Period
facilityType0..1CodeableConcept
practiceSetting0..1CodeableConcept
sourcePatientInfoI0..1Reference(Patient)
relatedI0..*Reference(Resource)

Beispiel

<DocumentReference xmlns="http://hl7.org/fhir">
    <meta>
        <profile value="https://demis.rki.de/fhir/StructureDefinition/SequenceDocument" />
    </meta>
    <status value="current" />
    <type>
        <coding>
            <system value="http://snomed.info/sct" />
            <code value="41482005" />
            <display value="Molecular sequence data (finding)" />
        </coding>
    </type>
    <content>
        <attachment>
            <contentType value="chemical/seq-na-fastq-gzip" />
            <title value="20004726_lib32570_nextseq_n0270_151bp_cleaned_R1.fastq.gz" />
        </attachment>
    </content>
</DocumentReference>