Implementierungsleitfaden für DEMIS Integrierte Genomische Surveillance (IGS)
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Zielgruppe dieses Leitfadens
Grundlagen und Überblick
Ressourcenmodell
Terminologien
Lifecyclemanagement
Datenupload per Labormanagementsystem
Weiterführende Informationen
Ressourcen
Conformance Resources
OperationDefinitions
ProcessNotificationSequence
StructureDefinitions
Meldevorgang (NotificationBundle)
Sequenzmeldevorgang (NotificationBundleSequence)
Meldung (Notification)
Sequenzmeldung (NotificationSequence)
Sequenz (Sequence)
Laborbericht (LaboratoryReport)
Sequenz-Laborbericht (LaboratoryReportSequence)
Erregernachweise (PathogenDetection)
Sequenz-Erregernachweis (PathogenDetectionSequence)
Probe (Specimen)
Sequenz-Probe (SpecimenSequence)
Sequenz-Dokument (SequenceDocument)
Material (Substance)
Adapter (AdapterSubstance)
Primer-Scheme (PrimerSubstance)
Sequenziergerät (SequencingDevice)
Erweiterungen (Extensions)
Grund der Sequenzierung (SequencingReason)
Verantwortlicher des Sequenz-Uploads (SequenceUploadSubmitter)
Status des Sequenz-Uploads (SequenceUploadStatus)
Datum des Sequenz-Uploads (SequenceUploadDate)
Verantwortlicher der Sequenz (SequenceAuthor)
Isolat (Isolate)
Referenz auf das SequenceDocument (SequenceDocumentreference)
Parameter (Parameters)
ProcessNotificationSequenceRequestParameters
ProcessNotificationSequenceResponseParameters
Terminology Resources
CodeSystems
instrument
repositoryName
sequencingPlatform
sequencingStrategy
sequencingSubstances
ValueSets
contentType
instrument
repositoryName
sequencingPlatform
sequencingReason
sequencingStrategy
sequencingSubstances
uploadStatus
Material (Substance)