Index

_

__init__() (mex.extractors.grippeweb.connector.GrippewebConnector method) (mex.extractors.ifsg.connector.IFSGConnector method) (mex.extractors.sinks.s3.S3Sink method) _check_availability() (mex.extractors.drop.DropApiConnector method) (mex.extractors.synopse.connector.ReportServerConnector method) _get_json_from_api() (mex.extractors.blueant.connector.BlueAntConnector method) _set_authentication() (mex.extractors.blueant.connector.BlueAntConnector method) (mex.extractors.confluence_vvt.connector.ConfluenceVvtConnector method) (mex.extractors.datscha_web.connector.DatschaWebConnector method) (mex.extractors.drop.DropApiConnector method) (mex.extractors.synopse.connector.ReportServerConnector method)

_set_url() (mex.extractors.blueant.connector.BlueAntConnector method) (mex.extractors.confluence_vvt.connector.ConfluenceVvtConnector method) (mex.extractors.datscha_web.connector.DatschaWebConnector method) (mex.extractors.drop.DropApiConnector method) (mex.extractors.igs.connector.IGSConnector method) (mex.extractors.open_data.connector.OpenDataConnector method) (mex.extractors.synopse.connector.ReportServerConnector method)

A

abrufverfahren (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) abstract (mex.extractors.endnote.model.EndnoteRecord attribute) activity1 (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) activity2 (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) additional_rki_units (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) affiliation (mex.extractors.open_data.models.source.OpenDataCreatorsOrContributors attribute) akronym_des_studientitels (mex.extractors.synopse.models.project.SynopseProject attribute) all_filter_mapping_path (mex.extractors.settings.Settings attribute) alternativer_titel (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) anonymisiert_pseudonymisiert (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) anschlussprojekt (mex.extractors.synopse.models.project.SynopseProject attribute)

api_key (mex.extractors.blueant.settings.BlueAntSettings attribute) API_VERSION (mex.extractors.drop.DropApiConnector attribute) art_der_verarbeiteten_uebermittelten_oder_offengelegten_daten (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) art_der_verarbeiteten_uebermittelten_oder_offengelegten_daten_in_drittstaat (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) assign_resource_relations_and_load() (in module mex.extractors.odk.transform) aufnahme_oder_aenderungsdatum (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) auftragskontrolle (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) auftragsverarbeiter (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) auftragsverarbeitung_art_28_dsgvo (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) auskunftsperson (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) auspraegungen (mex.extractors.synopse.models.variable.SynopseVariable attribute) authors (mex.extractors.endnote.model.EndnoteRecord attribute)

B

BaseRawData (class in mex.extractors.models) beitragende (mex.extractors.synopse.models.project.SynopseProject attribute) bemerkungen (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) beschreibung (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) (mex.extractors.synopse.models.study.SynopseStudy attribute) beschreibung_der_studie (mex.extractors.synopse.models.project.SynopseProject attribute) beschreibung_der_verarbeitungstaetigkeit_dateien (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) besteht_die_verarbeitung_aus_mehreren_dateien_oder_datenbanken (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) betroffene_personen (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) bezeichnung_der_verarbeitungstaetigkeit (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) biospecimen (mex.extractors.settings.Settings attribute)

BiospecimenResource (class in mex.extractors.biospecimen.models.source) BiospecimenSettings (class in mex.extractors.biospecimen.settings) blueant (mex.extractors.settings.Settings attribute) BlueAntClient (class in mex.extractors.blueant.models.project) BlueAntConnector (class in mex.extractors.blueant.connector) BlueAntPerson (class in mex.extractors.blueant.models.person) BlueAntPersonResponse (class in mex.extractors.blueant.models.person) BlueAntProject (class in mex.extractors.blueant.models.project) BlueAntProjectResponse (class in mex.extractors.blueant.models.project) BlueAntSettings (class in mex.extractors.blueant.settings) BlueAntSource (class in mex.extractors.blueant.models.source)

C

call_num (mex.extractors.endnote.model.EndnoteRecord attribute) category_label_de (mex.extractors.sumo.models.cc1_data_valuesets.Cc1DataValuesets attribute) category_label_en (mex.extractors.sumo.models.cc1_data_valuesets.Cc1DataValuesets attribute) Cc1DataModelNoKeda (class in mex.extractors.sumo.models.cc1_data_model_nokeda) Cc1DataValuesets (class in mex.extractors.sumo.models.cc1_data_valuesets) Cc2AuxMapping (class in mex.extractors.sumo.models.cc2_aux_mapping) Cc2AuxModel (class in mex.extractors.sumo.models.cc2_aux_model) Cc2AuxValuesets (class in mex.extractors.sumo.models.cc2_aux_valuesets) Cc2FeatProjection (class in mex.extractors.sumo.models.cc2_feat_projection) cells (mex.extractors.confluence_vvt.models.ConfluenceVvtRow attribute) Choices (mex.extractors.voxco.model.VoxcoVariable attribute) CHUNK_SIZE (mex.extractors.sinks.s3.S3Sink attribute) client_names (mex.extractors.blueant.models.source.BlueAntSource attribute) clientId (mex.extractors.blueant.models.project.BlueAntClient attribute) clients (mex.extractors.blueant.models.project.BlueAntProject attribute) close() (mex.extractors.grippeweb.connector.GrippewebConnector method) (mex.extractors.ifsg.connector.IFSGConnector method) (mex.extractors.sinks.s3.S3Sink method) code (mex.extractors.ifsg.models.meta_type.MetaType attribute) column_name (mex.extractors.sumo.models.cc2_aux_mapping.Cc2AuxMapping attribute) community_rki (mex.extractors.open_data.settings.OpenDataSettings attribute)

conceptdoi (mex.extractors.open_data.models.source.OpenDataParentResource attribute) conceptrecid (mex.extractors.open_data.models.source.OpenDataParentResource attribute) confluence_vvt (mex.extractors.settings.Settings attribute) ConfluenceVvtCell (class in mex.extractors.confluence_vvt.models) ConfluenceVvtConnector (class in mex.extractors.confluence_vvt.connector) ConfluenceVvtHeading (class in mex.extractors.confluence_vvt.models) ConfluenceVvtPage (class in mex.extractors.confluence_vvt.models) ConfluenceVvtRow (class in mex.extractors.confluence_vvt.models) ConfluenceVvtSettings (class in mex.extractors.confluence_vvt.settings) ConfluenceVvtTable (class in mex.extractors.confluence_vvt.models) ConfluenceVvtValue (class in mex.extractors.confluence_vvt.models) connect() (mex.extractors.ifsg.connector.NoOpPyodbc method) contributors (mex.extractors.open_data.models.source.OpenDataMetadata attribute) create_new_organization_with_official_name() (in module mex.extractors.sumo.transform) created (mex.extractors.open_data.models.source.OpenDataResourceVersion attribute) (mex.extractors.open_data.models.source.OpenDataVersionFiles attribute) creators (mex.extractors.open_data.models.source.OpenDataMetadata attribute) custom3 (mex.extractors.endnote.model.EndnoteRecord attribute) custom4 (mex.extractors.endnote.model.EndnoteRecord attribute) custom6 (mex.extractors.endnote.model.EndnoteRecord attribute) customer_org_unit_id (mex.extractors.seq_repo.model.SeqRepoSource attribute) customer_sample_name (mex.extractors.seq_repo.model.SeqRepoSource attribute)

D

data_type_name (mex.extractors.ifsg.models.meta_datatype.MetaDataType attribute) database (mex.extractors.endnote.model.EndnoteRecord attribute) DataType (mex.extractors.voxco.model.VoxcoVariable attribute) dateiformat (mex.extractors.synopse.models.study.SynopseStudy attribute) daten_oder_datenkategorien (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) datensatzuebersicht_path (mex.extractors.synopse.settings.SynopseSettings attribute) datenschutz_folgenabschaetzung_art_35_dsgvo (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) datentyp (mex.extractors.synopse.models.variable.SynopseVariable attribute) datenuebermittlung_in_drittstaat (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) datenverarbeitung_uebermittlung_oder_offenlegung (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) datscha_web (mex.extractors.settings.Settings attribute) DatschaWebConnector (class in mex.extractors.datscha_web.connector) DatschaWebItem (class in mex.extractors.datscha_web.models.item) DatschaWebSettings (class in mex.extractors.datscha_web.settings) delete_prefixes (mex.extractors.blueant.settings.BlueAntSettings attribute)

department (mex.extractors.blueant.models.source.BlueAntSource attribute) departmentId (mex.extractors.blueant.models.project.BlueAntProject attribute) depends_on_nokeda_variable (mex.extractors.sumo.models.cc2_aux_model.Cc2AuxModel attribute) description (mex.extractors.open_data.models.source.OpenDataMetadata attribute) disease_name (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) disease_name_en (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) dokumentation (mex.extractors.synopse.models.study.SynopseStudy attribute) domain (mex.extractors.sumo.models.cc1_data_model_nokeda.Cc1DataModelNoKeda attribute) (mex.extractors.sumo.models.cc2_aux_model.Cc2AuxModel attribute) domain_en (mex.extractors.sumo.models.cc1_data_model_nokeda.Cc1DataModelNoKeda attribute) drop_api_key (mex.extractors.settings.Settings attribute) drop_api_url (mex.extractors.settings.Settings attribute) DropApiConnector (class in mex.extractors.drop) ds_typ_id (mex.extractors.synopse.models.study.SynopseStudy attribute) (mex.extractors.synopse.models.study_overview.SynopseStudyOverview attribute)

E

eingabekontrolle (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) electronic_resource_num (mex.extractors.endnote.model.EndnoteRecord attribute) element_description (mex.extractors.sumo.models.cc1_data_model_nokeda.Cc1DataModelNoKeda attribute) (mex.extractors.sumo.models.cc2_aux_model.Cc2AuxModel attribute) element_description_en (mex.extractors.sumo.models.cc1_data_model_nokeda.Cc1DataModelNoKeda attribute) element_label (mex.extractors.sumo.models.cc1_data_model_nokeda.Cc1DataModelNoKeda attribute) element_label_en (mex.extractors.sumo.models.cc1_data_model_nokeda.Cc1DataModelNoKeda attribute) email (mex.extractors.blueant.models.person.BlueAntPerson attribute) empfaenger_der_daten_im_drittstaat (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) empfaenger_der_verarbeiteten_uebermittelten_oder_offengelegten_daten (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) end (mex.extractors.blueant.models.project.BlueAntProject attribute) (mex.extractors.blueant.models.source.BlueAntSource attribute) end_date (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) endnote (mex.extractors.settings.Settings attribute) EndnoteRecord (class in mex.extractors.endnote.model) EndnoteSettings (class in mex.extractors.endnote.settings) enum (mex.extractors.igs.model.IGSEnumSchema attribute) erfassername (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) erstellungs_datum (mex.extractors.synopse.models.study.SynopseStudy attribute) eu_verfahren (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) externe_partner (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) (mex.extractors.synopse.models.project.SynopseProject attribute) extract_biospecimen_contacts_by_email() (in module mex.extractors.biospecimen.extract) extract_biospecimen_organizations() (in module mex.extractors.biospecimen.extract) extract_biospecimen_resource() (in module mex.extractors.biospecimen.extract) extract_biospecimen_resources() (in module mex.extractors.biospecimen.extract) extract_blueant_organizations() (in module mex.extractors.blueant.extract) extract_blueant_project_leaders() (in module mex.extractors.blueant.extract) extract_blueant_sources() (in module mex.extractors.blueant.extract) extract_cc1_data_model_nokeda() (in module mex.extractors.sumo.extract) extract_cc1_data_valuesets() (in module mex.extractors.sumo.extract) extract_cc2_aux_mapping() (in module mex.extractors.sumo.extract) extract_cc2_aux_model() (in module mex.extractors.sumo.extract) extract_cc2_aux_valuesets() (in module mex.extractors.sumo.extract) extract_cc2_feat_projection() (in module mex.extractors.sumo.extract) extract_columns_by_table_and_column_name() (in module mex.extractors.grippeweb.extract) extract_confluence_vvt_authors() (in module mex.extractors.confluence_vvt.extract) extract_datscha_web_items() (in module mex.extractors.datscha_web.extract) extract_datscha_web_organizations() (in module mex.extractors.datscha_web.extract)

extract_datscha_web_source_contacts() (in module mex.extractors.datscha_web.extract) extract_endnote_bibliographic_resource() (in module mex.extractors.endnote.transform) extract_endnote_consents() (in module mex.extractors.endnote.transform) extract_endnote_persons_by_person_string() (in module mex.extractors.endnote.transform) extract_endnote_records() (in module mex.extractors.endnote.extract) extract_ff_project_authors() (in module mex.extractors.ff_projects.extract) extract_ff_projects_organizations() (in module mex.extractors.ff_projects.extract) extract_ff_projects_source() (in module mex.extractors.ff_projects.extract) extract_ff_projects_sources() (in module mex.extractors.ff_projects.extract) extract_files_for_parent_resource() (in module mex.extractors.open_data.extract) extract_grippeweb_organizations() (in module mex.extractors.grippeweb.extract) extract_igs_schemas() (in module mex.extractors.igs.extract) extract_international_projects_funding_sources() (in module mex.extractors.international_projects.extract) extract_international_projects_partner_organizations() (in module mex.extractors.international_projects.extract) extract_international_projects_project_leaders() (in module mex.extractors.international_projects.extract) extract_international_projects_source() (in module mex.extractors.international_projects.extract) extract_international_projects_sources() (in module mex.extractors.international_projects.extract) extract_ldap_actors_by_mail() (in module mex.extractors.igs.extract) extract_ldap_actors_for_functional_accounts() (in module mex.extractors.grippeweb.extract) extract_ldap_contact_points_by_emails() (in module mex.extractors.sumo.extract) extract_ldap_contact_points_by_name() (in module mex.extractors.sumo.extract) extract_ldap_persons() (in module mex.extractors.grippeweb.extract) extract_ldap_persons_voxco() (in module mex.extractors.voxco.extract) extract_odk_raw_data() (in module mex.extractors.odk.extract) extract_oldest_record_version_creationdate() (in module mex.extractors.open_data.extract) extract_open_data_persons_from_open_data_parent_resources() (in module mex.extractors.open_data.extract) extract_parent_resources() (in module mex.extractors.open_data.extract) extract_projects() (in module mex.extractors.synopse.extract) extract_source_project_coordinator() (in module mex.extractors.seq_repo.extract) extract_sources() (in module mex.extractors.seq_repo.extract) extract_sql_table() (in module mex.extractors.ifsg.extract) extract_study_data() (in module mex.extractors.synopse.extract) extract_study_overviews() (in module mex.extractors.synopse.extract) extract_synopse_contact() (in module mex.extractors.synopse.extract) extract_synopse_organizations() (in module mex.extractors.synopse.extract) extract_synopse_project_contributors() (in module mex.extractors.synopse.extract) extract_variables() (in module mex.extractors.synopse.extract) extract_voxco_organizations() (in module mex.extractors.voxco.extract) extract_voxco_variables() (in module mex.extractors.voxco.extract)

F

feature_abbr (mex.extractors.sumo.models.cc2_feat_projection.Cc2FeatProjection attribute) feature_description (mex.extractors.sumo.models.cc2_feat_projection.Cc2FeatProjection attribute) feature_domain (mex.extractors.sumo.models.cc2_feat_projection.Cc2FeatProjection attribute) feature_name_de (mex.extractors.sumo.models.cc2_feat_projection.Cc2FeatProjection attribute) feature_name_en (mex.extractors.sumo.models.cc2_feat_projection.Cc2FeatProjection attribute) feature_subdomain (mex.extractors.sumo.models.cc2_feat_projection.Cc2FeatProjection attribute) fetch_all_vvt_pages_ids() (in module mex.extractors.confluence_vvt.extract) ff_projects (mex.extractors.settings.Settings attribute) FFProjectsSettings (class in mex.extractors.ff_projects.settings) FFProjectsSource (class in mex.extractors.ff_projects.models.source) file_id (mex.extractors.open_data.models.source.OpenDataVersionFiles attribute) file_name (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) (mex.extractors.odk.model.ODKData attribute) file_path (mex.extractors.ff_projects.settings.FFProjectsSettings attribute) (mex.extractors.international_projects.settings.InternationalProjectsSettings attribute) files (mex.extractors.open_data.models.source.OpenDataParentResource attribute) filter_and_log_access_platforms() (in module mex.extractors.synopse.filter) filter_and_log_blueant_source() (in module mex.extractors.blueant.filter)

filter_and_log_blueant_sources() (in module mex.extractors.blueant.filter) filter_and_log_cc2_aux_model() (in module mex.extractors.sumo.filter) filter_and_log_ff_projects_source() (in module mex.extractors.ff_projects.filter) filter_and_log_ff_projects_sources() (in module mex.extractors.ff_projects.filter) filter_and_log_synopse_variables() (in module mex.extractors.synopse.filter) filter_by_global_rules() (in module mex.extractors.filters) filter_empty_statement_area_group() (in module mex.extractors.ifsg.filter) filter_id_type_of_diseases() (in module mex.extractors.ifsg.filter) filter_out_duplicate_source_ids() (in module mex.extractors.ff_projects.filter) filter_sources_on_latest_sequencing_date() (in module mex.extractors.seq_repo.filter) filter_variables() (in module mex.extractors.ifsg.filter) firstname (mex.extractors.blueant.models.person.BlueAntPerson attribute) foerderinstitution_oder_auftraggeber (mex.extractors.synopse.models.project.SynopseProject attribute) foerderprogr (mex.extractors.ff_projects.models.source.FFProjectsSource attribute) full_project_name (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) funding_program (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) funding_source (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) funding_type (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute)

G

gemeinsames_oder_verbundenes_verfahren (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) get_all_persons_from_all_pages() (in module mex.extractors.confluence_vvt.extract) get_all_units_from_all_pages() (in module mex.extractors.confluence_vvt.extract) get_clean_current_row_all_cols_data() (in module mex.extractors.confluence_vvt.parse_html) get_clean_file_name() (in module mex.extractors.biospecimen.extract) get_clean_names() (in module mex.extractors.ff_projects.extract) get_clean_organizations_names() (in module mex.extractors.international_projects.extract) get_clean_string() (in module mex.extractors.biospecimen.extract) get_client_name() (mex.extractors.blueant.connector.BlueAntConnector method) get_column_dict_by_pattern() (in module mex.extractors.odk.extract) get_contact_from_page() (in module mex.extractors.confluence_vvt.extract) get_contact_merged_ids_by_emails() (in module mex.extractors.sumo.transform) get_contact_merged_ids_by_names() (in module mex.extractors.sumo.transform) get_department_name() (mex.extractors.blueant.connector.BlueAntConnector method) get_doi() (in module mex.extractors.endnote.transform) get_end_year() (mex.extractors.blueant.models.source.BlueAntSource method) (mex.extractors.confluence_vvt.models.ConfluenceVvtPage method) (mex.extractors.datscha_web.models.item.DatschaWebItem method) (mex.extractors.ff_projects.models.source.FFProjectsSource method) (mex.extractors.international_projects.models.source.InternationalProjectsSource method) (mex.extractors.models.BaseRawData method) (mex.extractors.seq_repo.model.SeqRepoSource method) (mex.extractors.synopse.models.project.SynopseProject method) get_external_partner_and_publisher_by_label() (in module mex.extractors.odk.extract) get_extracted_primary_source_id_by_name() (in module mex.extractors.primary_source.helpers) get_file() (mex.extractors.drop.DropApiConnector method) get_files_for_resource_version() (mex.extractors.open_data.connector.OpenDataConnector method) get_funding_sources() (mex.extractors.international_projects.models.source.InternationalProjectsSource method) get_identifier_in_primary_source() (mex.extractors.blueant.models.source.BlueAntSource method) (mex.extractors.confluence_vvt.models.ConfluenceVvtPage method) (mex.extractors.datscha_web.models.item.DatschaWebItem method) (mex.extractors.ff_projects.models.source.FFProjectsSource method) (mex.extractors.international_projects.models.source.InternationalProjectsSource method) (mex.extractors.models.BaseRawData method) (mex.extractors.seq_repo.model.SeqRepoSource method) (mex.extractors.synopse.models.project.SynopseProject method) get_instrument_tool_or_apparatus() (in module mex.extractors.ifsg.transform) get_interne_vorgangsnummer_from_all_rows_data() (in module mex.extractors.confluence_vvt.parse_html) get_interne_vorgangsnummer_from_title() (in module mex.extractors.confluence_vvt.parse_html) get_involved_persons_from_page() (in module mex.extractors.confluence_vvt.extract) get_involved_units_from_page() (in module mex.extractors.confluence_vvt.extract) get_item() (mex.extractors.datscha_web.connector.DatschaWebConnector method) get_item_urls() (mex.extractors.datscha_web.connector.DatschaWebConnector method) get_json_from_api() (mex.extractors.igs.connector.IGSConnector method) get_merged_items() (in module mex.extractors.publisher.extract) get_oldest_resource_version_creation_date() (mex.extractors.open_data.connector.OpenDataConnector method) get_optional_string_from_cell() (in module mex.extractors.ff_projects.extract) get_or_create_external_partner() (in module mex.extractors.grippeweb.transform) get_or_create_externe_partner() (in module mex.extractors.biospecimen.transform) get_or_create_partner_organization() (in module mex.extractors.international_projects.transform) get_page_by_id() (mex.extractors.confluence_vvt.connector.ConfluenceVvtConnector method) get_page_data_by_id() (in module mex.extractors.confluence_vvt.extract) get_parent_resources() (mex.extractors.open_data.connector.OpenDataConnector method) get_partners() (mex.extractors.blueant.models.source.BlueAntSource method) (mex.extractors.confluence_vvt.models.ConfluenceVvtPage method) (mex.extractors.datscha_web.models.item.DatschaWebItem method) (mex.extractors.ff_projects.models.source.FFProjectsSource method) (mex.extractors.international_projects.models.source.InternationalProjectsSource method) (mex.extractors.models.BaseRawData method) (mex.extractors.seq_repo.model.SeqRepoSource method) (mex.extractors.synopse.models.project.SynopseProject method)

get_persons() (mex.extractors.blueant.connector.BlueAntConnector method) get_project_lead_persons() (mex.extractors.international_projects.models.source.InternationalProjectsSource method) get_project_lead_rki_units() (mex.extractors.international_projects.models.source.InternationalProjectsSource method) get_projects() (mex.extractors.blueant.connector.BlueAntConnector method) get_raw_file() (mex.extractors.drop.DropApiConnector method) get_resolved_project_coordinators_and_units() (in module mex.extractors.seq_repo.transform) get_responsible_unit_from_page() (in module mex.extractors.confluence_vvt.extract) get_row_data_for_all_rows() (in module mex.extractors.confluence_vvt.parse_html) get_start_year() (mex.extractors.blueant.models.source.BlueAntSource method) (mex.extractors.confluence_vvt.models.ConfluenceVvtPage method) (mex.extractors.datscha_web.models.item.DatschaWebItem method) (mex.extractors.ff_projects.models.source.FFProjectsSource method) (mex.extractors.international_projects.models.source.InternationalProjectsSource method) (mex.extractors.models.BaseRawData method) (mex.extractors.seq_repo.model.SeqRepoSource method) (mex.extractors.synopse.models.project.SynopseProject method) get_status_name() (mex.extractors.blueant.connector.BlueAntConnector method) get_string_from_cell() (in module mex.extractors.ff_projects.extract) get_temporal_entity_from_cell() (in module mex.extractors.ff_projects.extract) (in module mex.extractors.international_projects.extract) get_texts() (mex.extractors.confluence_vvt.models.ConfluenceVvtCell method) (mex.extractors.confluence_vvt.models.ConfluenceVvtHeading method) (mex.extractors.confluence_vvt.models.ConfluenceVvtRow method) (mex.extractors.confluence_vvt.models.ConfluenceVvtValue method) get_theme_for_activity_or_topic() (in module mex.extractors.international_projects.transform) get_type_description() (mex.extractors.blueant.connector.BlueAntConnector method) get_units() (mex.extractors.blueant.models.source.BlueAntSource method) (mex.extractors.confluence_vvt.models.ConfluenceVvtPage method) (mex.extractors.datscha_web.models.item.DatschaWebItem method) (mex.extractors.ff_projects.models.source.FFProjectsSource method) (mex.extractors.international_projects.models.source.InternationalProjectsSource method) (mex.extractors.models.BaseRawData method) (mex.extractors.seq_repo.model.SeqRepoSource method) (mex.extractors.synopse.models.project.SynopseProject method) get_value_row_by_heading() (mex.extractors.confluence_vvt.models.ConfluenceVvtTable method) get_value_set() (in module mex.extractors.odk.transform) get_values() (in module mex.extractors.biospecimen.extract) get_verantwortlichen() (in module mex.extractors.confluence_vvt.parse_html) get_wikidata_extracted_organization_id_by_name() (in module mex.extractors.wikidata.helpers) get_wikidata_organization_by_id() (in module mex.extractors.wikidata.helpers) get_wikidata_organization_ids_by_label() (in module mex.extractors.wikidata.helpers) get_year_from_zeitlicher_bezug() (in module mex.extractors.biospecimen.extract) grippeweb (mex.extractors.settings.Settings attribute) GrippewebConnector (class in mex.extractors.grippeweb.connector) GrippewebSettings (class in mex.extractors.grippeweb.settings) gui_text (mex.extractors.ifsg.models.meta_field.MetaField attribute) gui_tool_tip (mex.extractors.ifsg.models.meta_field.MetaField attribute)

H

hard_und_software (mex.extractors.datscha_web.models.item.DatschaWebItem attribute)

herkunft_der_daten (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) hint (mex.extractors.odk.model.ODKData attribute)

I

icd10_code (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) id (mex.extractors.blueant.models.person.BlueAntPerson attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtPage attribute) (mex.extractors.open_data.models.source.OpenDataLicenseOrFile attribute) (mex.extractors.open_data.models.source.OpenDataParentResource attribute) (mex.extractors.open_data.models.source.OpenDataResourceVersion attribute) Id (mex.extractors.voxco.model.VoxcoVariable attribute) id_catalogue (mex.extractors.ifsg.models.meta_catalogue2item.MetaCatalogue2Item attribute) (mex.extractors.ifsg.models.meta_field.MetaField attribute) id_catalogue2item (mex.extractors.ifsg.models.meta_catalogue2item.MetaCatalogue2Item attribute) (mex.extractors.ifsg.models.meta_catalogue2item2schema.MetaCatalogue2Item2Schema attribute) id_data_type (mex.extractors.ifsg.models.meta_datatype.MetaDataType attribute) (mex.extractors.ifsg.models.meta_field.MetaField attribute) id_field (mex.extractors.ifsg.models.meta_field.MetaField attribute) (mex.extractors.ifsg.models.meta_schema2field.MetaSchema2Field attribute) id_field_type (mex.extractors.ifsg.models.meta_field.MetaField attribute) id_item (mex.extractors.ifsg.models.meta_catalogue2item.MetaCatalogue2Item attribute) (mex.extractors.ifsg.models.meta_item.MetaItem attribute) id_loinc (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) id_mesh_begriff (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) id_schema (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) (mex.extractors.ifsg.models.meta_schema2field.MetaSchema2Field attribute) (mex.extractors.ifsg.models.meta_schema2type.MetaSchema2Type attribute) id_type (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) (mex.extractors.ifsg.models.meta_field.MetaField attribute) (mex.extractors.ifsg.models.meta_schema2type.MetaSchema2Type attribute) (mex.extractors.ifsg.models.meta_type.MetaType attribute)

identifier (mex.extractors.open_data.models.source.OpenDataRelatedIdentifiers attribute) ifsg (mex.extractors.settings.Settings attribute) ifsg_bundesland (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) IFSGConnector (class in mex.extractors.ifsg.connector) IFSGSettings (class in mex.extractors.ifsg.settings) igs (mex.extractors.settings.Settings attribute) IGSConnector (class in mex.extractors.igs.connector) IGSEnumSchema (class in mex.extractors.igs.model) IGSPropertiesSchema (class in mex.extractors.igs.model) IGSSchema (class in mex.extractors.igs.model) IGSSettings (class in mex.extractors.igs.settings) in_bundesland (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) in_database_static (mex.extractors.sumo.models.cc2_aux_model.Cc2AuxModel attribute) int_var (mex.extractors.synopse.models.variable.SynopseVariable attribute) international_projects (mex.extractors.settings.Settings attribute) InternationalProjectsSettings (class in mex.extractors.international_projects.settings) InternationalProjectsSource (class in mex.extractors.international_projects.models.source) interne_partner (mex.extractors.synopse.models.project.SynopseProject attribute) is_heading() (mex.extractors.confluence_vvt.models.ConfluenceVvtRow method) isbn (mex.extractors.endnote.model.EndnoteRecord attribute) item_id (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) item_name (mex.extractors.ifsg.models.meta_item.MetaItem attribute) item_name_en (mex.extractors.ifsg.models.meta_item.MetaItem attribute)

K

kategorie (mex.extractors.ff_projects.models.source.FFProjectsSource attribute) keep_varname (mex.extractors.synopse.models.variable.SynopseVariable attribute) kerberos_password (mex.extractors.settings.Settings attribute) kerberos_user (mex.extractors.settings.Settings attribute) key (mex.extractors.open_data.models.source.OpenDataVersionFiles attribute)

key_col (mex.extractors.biospecimen.settings.BiospecimenSettings attribute) keyword (mex.extractors.endnote.model.EndnoteRecord attribute) keywords (mex.extractors.open_data.models.source.OpenDataMetadata attribute) kontakt (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) kurzbeschreibung (mex.extractors.datscha_web.models.item.DatschaWebItem attribute)

L

label_choices (mex.extractors.odk.model.ODKData attribute) label_de (mex.extractors.sumo.models.cc2_aux_valuesets.Cc2AuxValuesets attribute) label_en (mex.extractors.sumo.models.cc2_aux_valuesets.Cc2AuxValuesets attribute) label_survey (mex.extractors.odk.model.ODKData attribute) language (mex.extractors.endnote.model.EndnoteRecord attribute) (mex.extractors.open_data.models.source.OpenDataMetadata attribute) lastname (mex.extractors.blueant.models.person.BlueAntPerson attribute) laufzeit_bis (mex.extractors.ff_projects.models.source.FFProjectsSource attribute) laufzeit_cells (mex.extractors.ff_projects.models.source.FFProjectsSource attribute) laufzeit_von (mex.extractors.ff_projects.models.source.FFProjectsSource attribute) lfd_nr (mex.extractors.ff_projects.models.source.FFProjectsSource attribute) license (mex.extractors.open_data.models.source.OpenDataMetadata attribute) liegenschaften_oder_organisationseinheiten_loz (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) lims_sample_id (mex.extractors.seq_repo.model.SeqRepoSource attribute)

Links (class in mex.extractors.open_data.models.source) links (mex.extractors.open_data.models.source.OpenDataVersionFiles attribute) list_files() (mex.extractors.drop.DropApiConnector method) list_name_choices (mex.extractors.odk.model.ODKData attribute) lizenz (mex.extractors.synopse.models.study.SynopseStudy attribute) load() (in module mex.extractors.sinks) (in module mex.extractors.sinks.base) (mex.extractors.sinks.s3.S3Sink method) load_extracted_primary_source_by_name() (in module mex.extractors.primary_source.helpers) load_job_definitions() (in module mex.extractors.pipeline) (in module mex.extractors.pipeline.base) load_yaml() (in module mex.extractors.utils) loeschfrist_der_daten (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) log_filter() (in module mex.extractors.logging) lookup_person_in_ldap_and_transfom() (in module mex.extractors.open_data.transform)

M

mapping_path (mex.extractors.biospecimen.settings.BiospecimenSettings attribute) (mex.extractors.blueant.settings.BlueAntSettings attribute) (mex.extractors.endnote.settings.EndnoteSettings attribute) (mex.extractors.ff_projects.settings.FFProjectsSettings attribute) (mex.extractors.grippeweb.settings.GrippewebSettings attribute) (mex.extractors.ifsg.settings.IFSGSettings attribute) (mex.extractors.igs.settings.IGSSettings attribute) (mex.extractors.international_projects.settings.InternationalProjectsSettings attribute) (mex.extractors.odk.settings.ODKSettings attribute) (mex.extractors.open_data.settings.OpenDataSettings attribute) (mex.extractors.seq_repo.settings.SeqRepoSettings attribute) (mex.extractors.sumo.settings.SumoSettings attribute) (mex.extractors.synopse.settings.SynopseSettings attribute) (mex.extractors.voxco.settings.VoxcoSettings attribute) (mex.extractors.wikidata.settings.WikidataSettings attribute) MetaCatalogue2Item (class in mex.extractors.ifsg.models.meta_catalogue2item) MetaCatalogue2Item2Schema (class in mex.extractors.ifsg.models.meta_catalogue2item2schema) metadata (mex.extractors.open_data.models.source.OpenDataParentResource attribute) (mex.extractors.open_data.models.source.OpenDataResourceVersion attribute) MetaDataType (class in mex.extractors.ifsg.models.meta_datatype) metadaten_zu_datensaetzen_path (mex.extractors.synopse.settings.SynopseSettings attribute) MetaDisease (class in mex.extractors.ifsg.models.meta_disease) MetaField (class in mex.extractors.ifsg.models.meta_field) MetaItem (class in mex.extractors.ifsg.models.meta_item) MetaSchema2Field (class in mex.extractors.ifsg.models.meta_schema2field) MetaSchema2Type (class in mex.extractors.ifsg.models.meta_schema2type) MetaType (class in mex.extractors.ifsg.models.meta_type) methoden (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) methodenbeschreibung (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) mex module mex.extractors module mex.extractors.artificial module mex.extractors.artificial.main module mex.extractors.biospecimen module mex.extractors.biospecimen.extract module mex.extractors.biospecimen.main module mex.extractors.biospecimen.models module mex.extractors.biospecimen.models.source module mex.extractors.biospecimen.settings module mex.extractors.biospecimen.transform module mex.extractors.blueant module mex.extractors.blueant.connector module mex.extractors.blueant.extract module mex.extractors.blueant.filter module mex.extractors.blueant.main module mex.extractors.blueant.models module mex.extractors.blueant.models.person module mex.extractors.blueant.models.project module mex.extractors.blueant.models.source module mex.extractors.blueant.settings module mex.extractors.blueant.transform module mex.extractors.confluence_vvt module mex.extractors.confluence_vvt.connector module mex.extractors.confluence_vvt.extract module mex.extractors.confluence_vvt.main module mex.extractors.confluence_vvt.models module mex.extractors.confluence_vvt.parse_html module mex.extractors.confluence_vvt.settings module mex.extractors.confluence_vvt.transform module mex.extractors.datscha_web module mex.extractors.datscha_web.connector module mex.extractors.datscha_web.extract module mex.extractors.datscha_web.main module mex.extractors.datscha_web.models module mex.extractors.datscha_web.models.item module mex.extractors.datscha_web.parse_html module mex.extractors.datscha_web.settings module mex.extractors.datscha_web.transform module mex.extractors.drop module mex.extractors.endnote module mex.extractors.endnote.extract module mex.extractors.endnote.main module mex.extractors.endnote.model module mex.extractors.endnote.settings module mex.extractors.endnote.transform module mex.extractors.ff_projects module mex.extractors.ff_projects.extract module mex.extractors.ff_projects.filter module mex.extractors.ff_projects.main module mex.extractors.ff_projects.models module mex.extractors.ff_projects.models.source module mex.extractors.ff_projects.settings module mex.extractors.ff_projects.transform module mex.extractors.filters module mex.extractors.grippeweb module mex.extractors.grippeweb.connector module mex.extractors.grippeweb.extract module mex.extractors.grippeweb.main module mex.extractors.grippeweb.settings module mex.extractors.grippeweb.transform module mex.extractors.ifsg module mex.extractors.ifsg.connector module mex.extractors.ifsg.extract module mex.extractors.ifsg.filter module mex.extractors.ifsg.main module mex.extractors.ifsg.models module mex.extractors.ifsg.models.meta_catalogue2item module mex.extractors.ifsg.models.meta_catalogue2item2schema module mex.extractors.ifsg.models.meta_datatype module mex.extractors.ifsg.models.meta_disease module mex.extractors.ifsg.models.meta_field module mex.extractors.ifsg.models.meta_item module mex.extractors.ifsg.models.meta_schema2field module mex.extractors.ifsg.models.meta_schema2type module mex.extractors.ifsg.models.meta_type module mex.extractors.ifsg.settings module mex.extractors.ifsg.transform module mex.extractors.igs module mex.extractors.igs.connector module mex.extractors.igs.extract module mex.extractors.igs.main module mex.extractors.igs.model module mex.extractors.igs.settings module mex.extractors.igs.transform module mex.extractors.international_projects module mex.extractors.international_projects.extract module mex.extractors.international_projects.main module mex.extractors.international_projects.models module mex.extractors.international_projects.models.source module mex.extractors.international_projects.settings module mex.extractors.international_projects.transform module mex.extractors.logging module mex.extractors.main module mex.extractors.models module mex.extractors.odk module mex.extractors.odk.extract module mex.extractors.odk.main module mex.extractors.odk.model module mex.extractors.odk.settings module mex.extractors.odk.transform module mex.extractors.open_data module mex.extractors.open_data.connector module mex.extractors.open_data.extract module mex.extractors.open_data.main module mex.extractors.open_data.models module mex.extractors.open_data.models.source module mex.extractors.open_data.settings module mex.extractors.open_data.transform module mex.extractors.pipeline module mex.extractors.pipeline.base module mex.extractors.pipeline.organigram module mex.extractors.pipeline.primary_source module mex.extractors.pipeline.wikidata module mex.extractors.primary_source module mex.extractors.primary_source.helpers module mex.extractors.publisher module mex.extractors.publisher.extract module mex.extractors.publisher.main module mex.extractors.seq_repo module mex.extractors.seq_repo.extract module mex.extractors.seq_repo.filter module mex.extractors.seq_repo.main module mex.extractors.seq_repo.model module mex.extractors.seq_repo.settings module mex.extractors.seq_repo.transform module mex.extractors.settings module mex.extractors.sinks module mex.extractors.sinks.base module mex.extractors.sinks.s3 module mex.extractors.sorters module mex.extractors.sumo module mex.extractors.sumo.extract module mex.extractors.sumo.filter module mex.extractors.sumo.main module mex.extractors.sumo.models module mex.extractors.sumo.models.base module mex.extractors.sumo.models.cc1_data_model_nokeda module mex.extractors.sumo.models.cc1_data_valuesets module mex.extractors.sumo.models.cc2_aux_mapping module mex.extractors.sumo.models.cc2_aux_model module mex.extractors.sumo.models.cc2_aux_valuesets module mex.extractors.sumo.models.cc2_feat_projection module mex.extractors.sumo.settings module mex.extractors.sumo.transform module mex.extractors.synopse module mex.extractors.synopse.connector module mex.extractors.synopse.extract module mex.extractors.synopse.filter module mex.extractors.synopse.main module mex.extractors.synopse.models module mex.extractors.synopse.models.project module mex.extractors.synopse.models.study module mex.extractors.synopse.models.study_overview module mex.extractors.synopse.models.variable module mex.extractors.synopse.settings module mex.extractors.synopse.transform module mex.extractors.utils module mex.extractors.voxco module mex.extractors.voxco.extract module mex.extractors.voxco.main module mex.extractors.voxco.model module mex.extractors.voxco.settings module mex.extractors.voxco.transform module mex.extractors.wikidata module mex.extractors.wikidata.helpers module mex.extractors.wikidata.settings module mimetype (mex.extractors.open_data.models.source.OpenDataVersionFiles attribute) mitwirkende_fachabteilung (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) mitwirkende_personen (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) model_computed_fields (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) (mex.extractors.biospecimen.settings.BiospecimenSettings attribute) (mex.extractors.blueant.models.person.BlueAntPerson attribute) (mex.extractors.blueant.models.person.BlueAntPersonResponse attribute) (mex.extractors.blueant.models.project.BlueAntClient attribute) (mex.extractors.blueant.models.project.BlueAntProject attribute) (mex.extractors.blueant.models.project.BlueAntProjectResponse attribute) (mex.extractors.blueant.models.source.BlueAntSource attribute) (mex.extractors.blueant.settings.BlueAntSettings attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtCell attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtHeading attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtPage attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtRow attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtTable attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtValue attribute) (mex.extractors.confluence_vvt.settings.ConfluenceVvtSettings attribute) (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) (mex.extractors.datscha_web.settings.DatschaWebSettings attribute) (mex.extractors.endnote.model.EndnoteRecord attribute) (mex.extractors.endnote.settings.EndnoteSettings attribute) (mex.extractors.ff_projects.models.source.FFProjectsSource attribute) (mex.extractors.ff_projects.settings.FFProjectsSettings attribute) (mex.extractors.grippeweb.settings.GrippewebSettings attribute) (mex.extractors.ifsg.models.meta_catalogue2item.MetaCatalogue2Item attribute) (mex.extractors.ifsg.models.meta_catalogue2item2schema.MetaCatalogue2Item2Schema attribute) (mex.extractors.ifsg.models.meta_datatype.MetaDataType attribute) (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) (mex.extractors.ifsg.models.meta_field.MetaField attribute) (mex.extractors.ifsg.models.meta_item.MetaItem attribute) (mex.extractors.ifsg.models.meta_schema2field.MetaSchema2Field attribute) (mex.extractors.ifsg.models.meta_schema2type.MetaSchema2Type attribute) (mex.extractors.ifsg.models.meta_type.MetaType attribute) (mex.extractors.ifsg.settings.IFSGSettings attribute) (mex.extractors.igs.model.IGSEnumSchema attribute) (mex.extractors.igs.model.IGSPropertiesSchema attribute) (mex.extractors.igs.model.IGSSchema attribute) (mex.extractors.igs.settings.IGSSettings attribute) (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) (mex.extractors.international_projects.settings.InternationalProjectsSettings attribute) (mex.extractors.models.BaseRawData attribute) (mex.extractors.odk.model.ODKData attribute) (mex.extractors.odk.settings.ODKSettings attribute) (mex.extractors.open_data.models.source.Links attribute) (mex.extractors.open_data.models.source.OpenDataCreatorsOrContributors attribute) (mex.extractors.open_data.models.source.OpenDataLicenseOrFile attribute) (mex.extractors.open_data.models.source.OpenDataMetadata attribute) (mex.extractors.open_data.models.source.OpenDataParentResource attribute) (mex.extractors.open_data.models.source.OpenDataRelatedIdentifiers attribute) (mex.extractors.open_data.models.source.OpenDataResourceVersion attribute) (mex.extractors.open_data.models.source.OpenDataVersionFiles attribute) (mex.extractors.open_data.settings.OpenDataSettings attribute) (mex.extractors.seq_repo.model.SeqRepoSource attribute) (mex.extractors.seq_repo.settings.SeqRepoSettings attribute) (mex.extractors.settings.Settings attribute) (mex.extractors.sumo.models.base.SumoBaseModel attribute) (mex.extractors.sumo.models.cc1_data_model_nokeda.Cc1DataModelNoKeda attribute) (mex.extractors.sumo.models.cc1_data_valuesets.Cc1DataValuesets attribute) (mex.extractors.sumo.models.cc2_aux_mapping.Cc2AuxMapping attribute) (mex.extractors.sumo.models.cc2_aux_model.Cc2AuxModel attribute) (mex.extractors.sumo.models.cc2_aux_valuesets.Cc2AuxValuesets attribute) (mex.extractors.sumo.models.cc2_feat_projection.Cc2FeatProjection attribute) (mex.extractors.sumo.settings.SumoSettings attribute) (mex.extractors.synopse.models.project.SynopseProject attribute) (mex.extractors.synopse.models.study.SynopseStudy attribute) (mex.extractors.synopse.models.study_overview.SynopseStudyOverview attribute) (mex.extractors.synopse.models.variable.SynopseVariable attribute) (mex.extractors.synopse.settings.SynopseSettings attribute) (mex.extractors.voxco.model.VoxcoVariable attribute) (mex.extractors.voxco.settings.VoxcoSettings attribute) (mex.extractors.wikidata.settings.WikidataSettings attribute)

model_config (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) (mex.extractors.biospecimen.settings.BiospecimenSettings attribute) (mex.extractors.blueant.models.person.BlueAntPerson attribute) (mex.extractors.blueant.models.person.BlueAntPersonResponse attribute) (mex.extractors.blueant.models.project.BlueAntClient attribute) (mex.extractors.blueant.models.project.BlueAntProject attribute) (mex.extractors.blueant.models.project.BlueAntProjectResponse attribute) (mex.extractors.blueant.models.source.BlueAntSource attribute) (mex.extractors.blueant.settings.BlueAntSettings attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtCell attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtHeading attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtPage attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtRow attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtTable attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtValue attribute) (mex.extractors.confluence_vvt.settings.ConfluenceVvtSettings attribute) (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) (mex.extractors.datscha_web.settings.DatschaWebSettings attribute) (mex.extractors.endnote.model.EndnoteRecord attribute) (mex.extractors.endnote.settings.EndnoteSettings attribute) (mex.extractors.ff_projects.models.source.FFProjectsSource attribute) (mex.extractors.ff_projects.settings.FFProjectsSettings attribute) (mex.extractors.grippeweb.settings.GrippewebSettings attribute) (mex.extractors.ifsg.models.meta_catalogue2item.MetaCatalogue2Item attribute) (mex.extractors.ifsg.models.meta_catalogue2item2schema.MetaCatalogue2Item2Schema attribute) (mex.extractors.ifsg.models.meta_datatype.MetaDataType attribute) (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) (mex.extractors.ifsg.models.meta_field.MetaField attribute) (mex.extractors.ifsg.models.meta_item.MetaItem attribute) (mex.extractors.ifsg.models.meta_schema2field.MetaSchema2Field attribute) (mex.extractors.ifsg.models.meta_schema2type.MetaSchema2Type attribute) (mex.extractors.ifsg.models.meta_type.MetaType attribute) (mex.extractors.ifsg.settings.IFSGSettings attribute) (mex.extractors.igs.model.IGSEnumSchema attribute) (mex.extractors.igs.model.IGSPropertiesSchema attribute) (mex.extractors.igs.model.IGSSchema attribute) (mex.extractors.igs.settings.IGSSettings attribute) (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) (mex.extractors.international_projects.settings.InternationalProjectsSettings attribute) (mex.extractors.models.BaseRawData attribute) (mex.extractors.odk.model.ODKData attribute) (mex.extractors.odk.settings.ODKSettings attribute) (mex.extractors.open_data.models.source.Links attribute) (mex.extractors.open_data.models.source.OpenDataCreatorsOrContributors attribute) (mex.extractors.open_data.models.source.OpenDataLicenseOrFile attribute) (mex.extractors.open_data.models.source.OpenDataMetadata attribute) (mex.extractors.open_data.models.source.OpenDataParentResource attribute) (mex.extractors.open_data.models.source.OpenDataRelatedIdentifiers attribute) (mex.extractors.open_data.models.source.OpenDataResourceVersion attribute) (mex.extractors.open_data.models.source.OpenDataVersionFiles attribute) (mex.extractors.open_data.settings.OpenDataSettings attribute) (mex.extractors.seq_repo.model.SeqRepoSource attribute) (mex.extractors.seq_repo.settings.SeqRepoSettings attribute) (mex.extractors.settings.Settings attribute) (mex.extractors.sumo.models.base.SumoBaseModel attribute) (mex.extractors.sumo.models.cc1_data_model_nokeda.Cc1DataModelNoKeda attribute) (mex.extractors.sumo.models.cc1_data_valuesets.Cc1DataValuesets attribute) (mex.extractors.sumo.models.cc2_aux_mapping.Cc2AuxMapping attribute) (mex.extractors.sumo.models.cc2_aux_model.Cc2AuxModel attribute) (mex.extractors.sumo.models.cc2_aux_valuesets.Cc2AuxValuesets attribute) (mex.extractors.sumo.models.cc2_feat_projection.Cc2FeatProjection attribute) (mex.extractors.sumo.settings.SumoSettings attribute) (mex.extractors.synopse.models.project.SynopseProject attribute) (mex.extractors.synopse.models.study.SynopseStudy attribute) (mex.extractors.synopse.models.study_overview.SynopseStudyOverview attribute) (mex.extractors.synopse.models.variable.SynopseVariable attribute) (mex.extractors.synopse.settings.SynopseSettings attribute) (mex.extractors.voxco.model.VoxcoVariable attribute) (mex.extractors.voxco.settings.VoxcoSettings attribute) (mex.extractors.wikidata.settings.WikidataSettings attribute) model_fields (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) (mex.extractors.biospecimen.settings.BiospecimenSettings attribute) (mex.extractors.blueant.models.person.BlueAntPerson attribute) (mex.extractors.blueant.models.person.BlueAntPersonResponse attribute) (mex.extractors.blueant.models.project.BlueAntClient attribute) (mex.extractors.blueant.models.project.BlueAntProject attribute) (mex.extractors.blueant.models.project.BlueAntProjectResponse attribute) (mex.extractors.blueant.models.source.BlueAntSource attribute) (mex.extractors.blueant.settings.BlueAntSettings attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtCell attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtHeading attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtPage attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtRow attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtTable attribute) (mex.extractors.confluence_vvt.models.ConfluenceVvtValue attribute) (mex.extractors.confluence_vvt.settings.ConfluenceVvtSettings attribute) (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) (mex.extractors.datscha_web.settings.DatschaWebSettings attribute) (mex.extractors.endnote.model.EndnoteRecord attribute) (mex.extractors.endnote.settings.EndnoteSettings attribute) (mex.extractors.ff_projects.models.source.FFProjectsSource attribute) (mex.extractors.ff_projects.settings.FFProjectsSettings attribute) (mex.extractors.grippeweb.settings.GrippewebSettings attribute) (mex.extractors.ifsg.models.meta_catalogue2item.MetaCatalogue2Item attribute) (mex.extractors.ifsg.models.meta_catalogue2item2schema.MetaCatalogue2Item2Schema attribute) (mex.extractors.ifsg.models.meta_datatype.MetaDataType attribute) (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) (mex.extractors.ifsg.models.meta_field.MetaField attribute) (mex.extractors.ifsg.models.meta_item.MetaItem attribute) (mex.extractors.ifsg.models.meta_schema2field.MetaSchema2Field attribute) (mex.extractors.ifsg.models.meta_schema2type.MetaSchema2Type attribute) (mex.extractors.ifsg.models.meta_type.MetaType attribute) (mex.extractors.ifsg.settings.IFSGSettings attribute) (mex.extractors.igs.model.IGSEnumSchema attribute) (mex.extractors.igs.model.IGSPropertiesSchema attribute) (mex.extractors.igs.model.IGSSchema attribute) (mex.extractors.igs.settings.IGSSettings attribute) (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) (mex.extractors.international_projects.settings.InternationalProjectsSettings attribute) (mex.extractors.models.BaseRawData attribute) (mex.extractors.odk.model.ODKData attribute) (mex.extractors.odk.settings.ODKSettings attribute) (mex.extractors.open_data.models.source.Links attribute) (mex.extractors.open_data.models.source.OpenDataCreatorsOrContributors attribute) (mex.extractors.open_data.models.source.OpenDataLicenseOrFile attribute) (mex.extractors.open_data.models.source.OpenDataMetadata attribute) (mex.extractors.open_data.models.source.OpenDataParentResource attribute) (mex.extractors.open_data.models.source.OpenDataRelatedIdentifiers attribute) (mex.extractors.open_data.models.source.OpenDataResourceVersion attribute) (mex.extractors.open_data.models.source.OpenDataVersionFiles attribute) (mex.extractors.open_data.settings.OpenDataSettings attribute) (mex.extractors.seq_repo.model.SeqRepoSource attribute) (mex.extractors.seq_repo.settings.SeqRepoSettings attribute) (mex.extractors.settings.Settings attribute) (mex.extractors.sumo.models.base.SumoBaseModel attribute) (mex.extractors.sumo.models.cc1_data_model_nokeda.Cc1DataModelNoKeda attribute) (mex.extractors.sumo.models.cc1_data_valuesets.Cc1DataValuesets attribute) (mex.extractors.sumo.models.cc2_aux_mapping.Cc2AuxMapping attribute) (mex.extractors.sumo.models.cc2_aux_model.Cc2AuxModel attribute) (mex.extractors.sumo.models.cc2_aux_valuesets.Cc2AuxValuesets attribute) (mex.extractors.sumo.models.cc2_feat_projection.Cc2FeatProjection attribute) (mex.extractors.sumo.settings.SumoSettings attribute) (mex.extractors.synopse.models.project.SynopseProject attribute) (mex.extractors.synopse.models.study.SynopseStudy attribute) (mex.extractors.synopse.models.study_overview.SynopseStudyOverview attribute) (mex.extractors.synopse.models.variable.SynopseVariable attribute) (mex.extractors.synopse.settings.SynopseSettings attribute) (mex.extractors.voxco.model.VoxcoVariable attribute) (mex.extractors.voxco.settings.VoxcoSettings attribute) (mex.extractors.wikidata.settings.WikidataSettings attribute) modified (mex.extractors.open_data.models.source.OpenDataParentResource attribute) module mex mex.extractors mex.extractors.artificial mex.extractors.artificial.main mex.extractors.biospecimen mex.extractors.biospecimen.extract mex.extractors.biospecimen.main mex.extractors.biospecimen.models mex.extractors.biospecimen.models.source mex.extractors.biospecimen.settings mex.extractors.biospecimen.transform mex.extractors.blueant mex.extractors.blueant.connector mex.extractors.blueant.extract mex.extractors.blueant.filter mex.extractors.blueant.main mex.extractors.blueant.models mex.extractors.blueant.models.person mex.extractors.blueant.models.project mex.extractors.blueant.models.source mex.extractors.blueant.settings mex.extractors.blueant.transform mex.extractors.confluence_vvt mex.extractors.confluence_vvt.connector mex.extractors.confluence_vvt.extract mex.extractors.confluence_vvt.main mex.extractors.confluence_vvt.models mex.extractors.confluence_vvt.parse_html mex.extractors.confluence_vvt.settings mex.extractors.confluence_vvt.transform mex.extractors.datscha_web mex.extractors.datscha_web.connector mex.extractors.datscha_web.extract mex.extractors.datscha_web.main mex.extractors.datscha_web.models mex.extractors.datscha_web.models.item mex.extractors.datscha_web.parse_html mex.extractors.datscha_web.settings mex.extractors.datscha_web.transform mex.extractors.drop mex.extractors.endnote mex.extractors.endnote.extract mex.extractors.endnote.main mex.extractors.endnote.model mex.extractors.endnote.settings mex.extractors.endnote.transform mex.extractors.ff_projects mex.extractors.ff_projects.extract mex.extractors.ff_projects.filter mex.extractors.ff_projects.main mex.extractors.ff_projects.models mex.extractors.ff_projects.models.source mex.extractors.ff_projects.settings mex.extractors.ff_projects.transform mex.extractors.filters mex.extractors.grippeweb mex.extractors.grippeweb.connector mex.extractors.grippeweb.extract mex.extractors.grippeweb.main mex.extractors.grippeweb.settings mex.extractors.grippeweb.transform mex.extractors.ifsg mex.extractors.ifsg.connector mex.extractors.ifsg.extract mex.extractors.ifsg.filter mex.extractors.ifsg.main mex.extractors.ifsg.models mex.extractors.ifsg.models.meta_catalogue2item mex.extractors.ifsg.models.meta_catalogue2item2schema mex.extractors.ifsg.models.meta_datatype mex.extractors.ifsg.models.meta_disease mex.extractors.ifsg.models.meta_field mex.extractors.ifsg.models.meta_item mex.extractors.ifsg.models.meta_schema2field mex.extractors.ifsg.models.meta_schema2type mex.extractors.ifsg.models.meta_type mex.extractors.ifsg.settings mex.extractors.ifsg.transform mex.extractors.igs mex.extractors.igs.connector mex.extractors.igs.extract mex.extractors.igs.main mex.extractors.igs.model mex.extractors.igs.settings mex.extractors.igs.transform mex.extractors.international_projects mex.extractors.international_projects.extract mex.extractors.international_projects.main mex.extractors.international_projects.models mex.extractors.international_projects.models.source mex.extractors.international_projects.settings mex.extractors.international_projects.transform mex.extractors.logging mex.extractors.main mex.extractors.models mex.extractors.odk mex.extractors.odk.extract mex.extractors.odk.main mex.extractors.odk.model mex.extractors.odk.settings mex.extractors.odk.transform mex.extractors.open_data mex.extractors.open_data.connector mex.extractors.open_data.extract mex.extractors.open_data.main mex.extractors.open_data.models mex.extractors.open_data.models.source mex.extractors.open_data.settings mex.extractors.open_data.transform mex.extractors.pipeline mex.extractors.pipeline.base mex.extractors.pipeline.organigram mex.extractors.pipeline.primary_source mex.extractors.pipeline.wikidata mex.extractors.primary_source mex.extractors.primary_source.helpers mex.extractors.publisher mex.extractors.publisher.extract mex.extractors.publisher.main mex.extractors.seq_repo mex.extractors.seq_repo.extract mex.extractors.seq_repo.filter mex.extractors.seq_repo.main mex.extractors.seq_repo.model mex.extractors.seq_repo.settings mex.extractors.seq_repo.transform mex.extractors.settings mex.extractors.sinks mex.extractors.sinks.base mex.extractors.sinks.s3 mex.extractors.sorters mex.extractors.sumo mex.extractors.sumo.extract mex.extractors.sumo.filter mex.extractors.sumo.main mex.extractors.sumo.models mex.extractors.sumo.models.base mex.extractors.sumo.models.cc1_data_model_nokeda mex.extractors.sumo.models.cc1_data_valuesets mex.extractors.sumo.models.cc2_aux_mapping mex.extractors.sumo.models.cc2_aux_model mex.extractors.sumo.models.cc2_aux_valuesets mex.extractors.sumo.models.cc2_feat_projection mex.extractors.sumo.settings mex.extractors.sumo.transform mex.extractors.synopse mex.extractors.synopse.connector mex.extractors.synopse.extract mex.extractors.synopse.filter mex.extractors.synopse.main mex.extractors.synopse.models mex.extractors.synopse.models.project mex.extractors.synopse.models.study mex.extractors.synopse.models.study_overview mex.extractors.synopse.models.variable mex.extractors.synopse.settings mex.extractors.synopse.transform mex.extractors.utils mex.extractors.voxco mex.extractors.voxco.extract mex.extractors.voxco.main mex.extractors.voxco.model mex.extractors.voxco.settings mex.extractors.voxco.transform mex.extractors.wikidata mex.extractors.wikidata.helpers mex.extractors.wikidata.settings mssql_connection_dsn (mex.extractors.grippeweb.settings.GrippewebSettings attribute) (mex.extractors.ifsg.settings.IFSGSettings attribute)

N

nachname (mex.extractors.datscha_web.settings.DatschaWebSettings attribute) name (mex.extractors.blueant.models.project.BlueAntProject attribute) (mex.extractors.blueant.models.source.BlueAntSource attribute) (mex.extractors.open_data.models.source.OpenDataCreatorsOrContributors attribute) name_choices (mex.extractors.odk.model.ODKData attribute)

name_des_drittstaats (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) name_survey (mex.extractors.odk.model.ODKData attribute) NoOpPyodbc (class in mex.extractors.ifsg.connector) number (mex.extractors.blueant.models.project.BlueAntProject attribute) (mex.extractors.blueant.models.source.BlueAntSource attribute) (mex.extractors.endnote.model.EndnoteRecord attribute)

O

odk (mex.extractors.settings.Settings attribute) ODKData (class in mex.extractors.odk.model) ODKSettings (class in mex.extractors.odk.settings) offizieller_titel_der_probensammlung (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) open_data (mex.extractors.settings.Settings attribute) OpenDataConnector (class in mex.extractors.open_data.connector) OpenDataCreatorsOrContributors (class in mex.extractors.open_data.models.source) OpenDataLicenseOrFile (class in mex.extractors.open_data.models.source) OpenDataMetadata (class in mex.extractors.open_data.models.source)

OpenDataParentResource (class in mex.extractors.open_data.models.source) OpenDataRelatedIdentifiers (class in mex.extractors.open_data.models.source) OpenDataResourceVersion (class in mex.extractors.open_data.models.source) OpenDataSettings (class in mex.extractors.open_data.settings) OpenDataVersionFiles (class in mex.extractors.open_data.models.source) orcid (mex.extractors.open_data.models.source.OpenDataCreatorsOrContributors attribute) organisation (mex.extractors.datscha_web.settings.DatschaWebSettings attribute) originalfrage (mex.extractors.synopse.models.variable.SynopseVariable attribute) overview_page_id (mex.extractors.confluence_vvt.settings.ConfluenceVvtSettings attribute)

P

pages (mex.extractors.endnote.model.EndnoteRecord attribute) parse_columns_by_column_name() (mex.extractors.grippeweb.connector.GrippewebConnector method) parse_data_html_page() (in module mex.extractors.confluence_vvt.parse_html) parse_detail_block() (in module mex.extractors.datscha_web.parse_html) parse_item_urls_from_overview_html() (in module mex.extractors.datscha_web.parse_html) parse_rows() (mex.extractors.ifsg.connector.IFSGConnector method) parse_single_item_html() (in module mex.extractors.datscha_web.parse_html) parse_unit_loz() (in module mex.extractors.datscha_web.parse_html) partner_organization (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) password (mex.extractors.confluence_vvt.settings.ConfluenceVvtSettings attribute) periodical (mex.extractors.endnote.model.EndnoteRecord attribute) personnelNumber (mex.extractors.blueant.models.person.BlueAntPerson attribute) persons (mex.extractors.blueant.models.person.BlueAntPersonResponse attribute) plattform (mex.extractors.synopse.models.study.SynopseStudy attribute) plattform_adresse (mex.extractors.synopse.models.study.SynopseStudy attribute) project_abbreviation (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) project_coordinators (mex.extractors.seq_repo.model.SeqRepoSource attribute)

project_id (mex.extractors.seq_repo.model.SeqRepoSource attribute) project_lead_person (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) project_lead_rki_unit (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) project_name (mex.extractors.seq_repo.model.SeqRepoSource attribute) project_studientitel (mex.extractors.synopse.models.project.SynopseProject attribute) projectLeaderEmployeeId (mex.extractors.blueant.models.source.BlueAntSource attribute) projectLeaderId (mex.extractors.blueant.models.project.BlueAntProject attribute) projects (mex.extractors.blueant.models.project.BlueAntProjectResponse attribute) projekt_und_studienverwaltung_path (mex.extractors.synopse.settings.SynopseSettings attribute) projektbeginn (mex.extractors.synopse.models.project.SynopseProject attribute) projektdokumentation (mex.extractors.synopse.models.project.SynopseProject attribute) projektende (mex.extractors.synopse.models.project.SynopseProject attribute) projektleiter (mex.extractors.ff_projects.models.source.FFProjectsSource attribute) properties (mex.extractors.igs.model.IGSPropertiesSchema attribute) pub_dates (mex.extractors.endnote.model.EndnoteRecord attribute) publication_date (mex.extractors.open_data.models.source.OpenDataMetadata attribute) publisher (mex.extractors.endnote.model.EndnoteRecord attribute) pw (mex.extractors.datscha_web.settings.DatschaWebSettings attribute)

Q

QuestionText (mex.extractors.voxco.model.VoxcoVariable attribute)

R

raeumlicher_bezug (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) raw_data_path (mex.extractors.biospecimen.settings.BiospecimenSettings attribute) (mex.extractors.odk.settings.ODKSettings attribute) (mex.extractors.sumo.settings.SumoSettings attribute) rec_number (mex.extractors.endnote.model.EndnoteRecord attribute) rechte (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) (mex.extractors.synopse.models.study.SynopseStudy attribute) rechtsgrundlage (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) ref_type (mex.extractors.endnote.model.EndnoteRecord attribute) reference_def_a (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) reference_def_b (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) reference_def_c (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) reference_def_d (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) reference_def_e (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) related_identifiers (mex.extractors.open_data.models.source.OpenDataMetadata attribute)

related_urls (mex.extractors.endnote.model.EndnoteRecord attribute) relation (mex.extractors.open_data.models.source.OpenDataRelatedIdentifiers attribute) remove_prefixes_from_name() (in module mex.extractors.blueant.extract) report_server_password (mex.extractors.synopse.settings.SynopseSettings attribute) report_server_url (mex.extractors.synopse.settings.SynopseSettings attribute) report_server_username (mex.extractors.synopse.settings.SynopseSettings attribute) ReportServerConnector (class in mex.extractors.synopse.connector) request() (mex.extractors.open_data.connector.OpenDataConnector method) ressourcentyp_allgemein (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) ressourcentyp_speziell (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) rki_az (mex.extractors.ff_projects.models.source.FFProjectsSource attribute) rki_internal_project_number (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) rki_oe (mex.extractors.ff_projects.models.source.FFProjectsSource attribute) rows (mex.extractors.confluence_vvt.models.ConfluenceVvtTable attribute) run_job_in_process() (in module mex.extractors.pipeline) (in module mex.extractors.pipeline.base)

S

s3_access_key_id (mex.extractors.settings.Settings attribute) s3_bucket_key (mex.extractors.settings.Settings attribute) s3_endpoint_url (mex.extractors.settings.Settings attribute) s3_secret_access_key (mex.extractors.settings.Settings attribute) S3Sink (class in mex.extractors.sinks.s3) schedule (mex.extractors.settings.Settings attribute) schlagworte (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) schlagworte_themen (mex.extractors.synopse.models.study.SynopseStudy attribute) schutzmassnahmen_art_32_dsgvo (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) search() (mex.extractors.confluence_vvt.models.ConfluenceVvtCell method) secondary_authors (mex.extractors.endnote.model.EndnoteRecord attribute) secondary_title (mex.extractors.endnote.model.EndnoteRecord attribute) self (mex.extractors.open_data.models.source.Links attribute) seq_repo (mex.extractors.settings.Settings attribute) SeqRepoSettings (class in mex.extractors.seq_repo.settings) SeqRepoSource (class in mex.extractors.seq_repo.model) sequencing_date (mex.extractors.seq_repo.model.SeqRepoSource attribute) sequencing_platform (mex.extractors.seq_repo.model.SeqRepoSource attribute) SERVICE_NAME (mex.extractors.sinks.s3.S3Sink attribute) Settings (class in mex.extractors.settings) sheet_name (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) (mex.extractors.sumo.models.cc1_data_valuesets.Cc1DataValuesets attribute) (mex.extractors.sumo.models.cc2_aux_mapping.Cc2AuxMapping attribute) skip_clients (mex.extractors.ff_projects.settings.FFProjectsSettings attribute) skip_extractors (mex.extractors.settings.Settings attribute) skip_funding (mex.extractors.ff_projects.settings.FFProjectsSettings attribute) skip_labels (mex.extractors.blueant.settings.BlueAntSettings attribute) skip_merged_items (mex.extractors.settings.Settings attribute) skip_pages (mex.extractors.confluence_vvt.settings.ConfluenceVvtSettings attribute) skip_topics (mex.extractors.ff_projects.settings.FFProjectsSettings attribute)

skip_years_strings (mex.extractors.ff_projects.settings.FFProjectsSettings attribute) sort (mex.extractors.ifsg.models.meta_field.MetaField attribute) species (mex.extractors.seq_repo.model.SeqRepoSource attribute) specimen_name (mex.extractors.ifsg.models.meta_disease.MetaDisease attribute) sql_table_name (mex.extractors.ifsg.models.meta_type.MetaType attribute) start (mex.extractors.blueant.models.project.BlueAntProject attribute) (mex.extractors.blueant.models.source.BlueAntSource attribute) start_date (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) statement_area_group (mex.extractors.ifsg.models.meta_field.MetaField attribute) status (mex.extractors.blueant.models.source.BlueAntSource attribute) statusId (mex.extractors.blueant.models.project.BlueAntProject attribute) studie (mex.extractors.synopse.models.study.SynopseStudy attribute) (mex.extractors.synopse.models.variable.SynopseVariable attribute) studie_id (mex.extractors.synopse.models.variable.SynopseVariable attribute) studien_id (mex.extractors.synopse.models.project.SynopseProject attribute) (mex.extractors.synopse.models.study.SynopseStudy attribute) (mex.extractors.synopse.models.study_overview.SynopseStudyOverview attribute) studienart_studientyp (mex.extractors.synopse.models.project.SynopseProject attribute) studienbezug (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) sumo (mex.extractors.settings.Settings attribute) SumoBaseModel (class in mex.extractors.sumo.models.base) SumoSettings (class in mex.extractors.sumo.settings) synopse (mex.extractors.settings.Settings attribute) synopse_id (mex.extractors.synopse.models.study_overview.SynopseStudyOverview attribute) (mex.extractors.synopse.models.variable.SynopseVariable attribute) SynopseProject (class in mex.extractors.synopse.models.project) SynopseSettings (class in mex.extractors.synopse.settings) SynopseStudy (class in mex.extractors.synopse.models.study) SynopseStudyOverview (class in mex.extractors.synopse.models.study_overview) SynopseVariable (class in mex.extractors.synopse.models.variable)

T

tables (mex.extractors.confluence_vvt.models.ConfluenceVvtPage attribute) template_v1_mapping_path (mex.extractors.confluence_vvt.settings.ConfluenceVvtSettings attribute) tertiary_authors (mex.extractors.endnote.model.EndnoteRecord attribute) text (mex.extractors.confluence_vvt.models.ConfluenceVvtHeading attribute) Text (mex.extractors.voxco.model.VoxcoVariable attribute) text_dt (mex.extractors.synopse.models.variable.SynopseVariable attribute) texts (mex.extractors.confluence_vvt.models.ConfluenceVvtValue attribute) thema (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) thema_des_projekts (mex.extractors.ff_projects.models.source.FFProjectsSource attribute) thema_und_fragebogenausschnitt (mex.extractors.synopse.models.variable.SynopseVariable attribute) titel_datenset (mex.extractors.synopse.models.study.SynopseStudy attribute) (mex.extractors.synopse.models.study_overview.SynopseStudyOverview attribute) title (mex.extractors.confluence_vvt.models.ConfluenceVvtPage attribute) (mex.extractors.endnote.model.EndnoteRecord attribute) (mex.extractors.open_data.models.source.OpenDataParentResource attribute) to_transport (mex.extractors.ifsg.models.meta_field.MetaField attribute) tools_instrumente_oder_apparate (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) topic1 (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) topic2 (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) topological_sort() (in module mex.extractors.sorters) transform_biospecimen_resource_to_mex_resource() (in module mex.extractors.biospecimen.transform) transform_blueant_sources_to_extracted_activities() (in module mex.extractors.blueant.transform) transform_confluence_vvt_activities_to_extracted_activities() (in module mex.extractors.confluence_vvt.transform) transform_confluence_vvt_page_to_extracted_activity() (in module mex.extractors.confluence_vvt.transform) transform_datscha_web_items_to_mex_activities() (in module mex.extractors.datscha_web.transform) transform_feat_projection_variable_to_mex_variable() (in module mex.extractors.sumo.transform) transform_feat_variable_to_mex_variable_group() (in module mex.extractors.sumo.transform) transform_ff_projects_source_to_extracted_activity() (in module mex.extractors.ff_projects.transform) transform_grippeweb_access_platform_to_extracted_access_platform() (in module mex.extractors.grippeweb.transform) transform_grippeweb_resource_mappings_to_dict() (in module mex.extractors.grippeweb.transform) transform_grippeweb_resource_mappings_to_extracted_resources() (in module mex.extractors.grippeweb.transform) transform_grippeweb_variable_group_to_extracted_variable_groups() (in module mex.extractors.grippeweb.transform) transform_grippeweb_variable_to_extracted_variables() (in module mex.extractors.grippeweb.transform) transform_ifsg_data_to_mex_variable_group() (in module mex.extractors.ifsg.transform) transform_ifsg_data_to_mex_variables() (in module mex.extractors.ifsg.transform) transform_igs_access_platform() (in module mex.extractors.igs.transform) transform_igs_schemas_to_resources() (in module mex.extractors.igs.transform) transform_international_projects_source_to_extracted_activity() (in module mex.extractors.international_projects.transform)

transform_international_projects_sources_to_extracted_activities() (in module mex.extractors.international_projects.transform) transform_model_nokeda_variable_to_mex_variable_group() (in module mex.extractors.sumo.transform) transform_nokeda_aux_variable_to_mex_variable() (in module mex.extractors.sumo.transform) transform_nokeda_aux_variable_to_mex_variable_group() (in module mex.extractors.sumo.transform) transform_nokeda_model_variable_to_mex_variable() (in module mex.extractors.sumo.transform) transform_odk_data_to_extracted_variables() (in module mex.extractors.odk.transform) transform_odk_resources_to_mex_resources() (in module mex.extractors.odk.transform) transform_open_data_distributions() (in module mex.extractors.open_data.transform) transform_open_data_parent_resource_to_mex_resource() (in module mex.extractors.open_data.transform) transform_open_data_person_affiliations_to_organisations() (in module mex.extractors.open_data.transform) transform_open_data_persons() (in module mex.extractors.open_data.transform) transform_open_data_persons_not_in_ldap() (in module mex.extractors.open_data.transform) transform_overviews_to_resource_lookup() (in module mex.extractors.synopse.transform) transform_resource_disease_to_mex_resource() (in module mex.extractors.ifsg.transform) transform_resource_disease_to_mex_resource_row() (in module mex.extractors.ifsg.transform) transform_resource_feat_model_to_mex_resource() (in module mex.extractors.sumo.transform) transform_resource_nokeda_to_mex_resource() (in module mex.extractors.sumo.transform) transform_resource_parent_to_mex_resource() (in module mex.extractors.ifsg.transform) transform_resource_state_to_mex_resource() (in module mex.extractors.ifsg.transform) transform_seq_repo_access_platform_to_extracted_access_platform() (in module mex.extractors.seq_repo.transform) transform_seq_repo_activities_to_extracted_activities() (in module mex.extractors.seq_repo.transform) transform_seq_repo_resource_to_extracted_resource() (in module mex.extractors.seq_repo.transform) transform_sumo_access_platform_to_mex_access_platform() (in module mex.extractors.sumo.transform) transform_sumo_activity_to_extracted_activity() (in module mex.extractors.sumo.transform) transform_synopse_data_to_mex_resources() (in module mex.extractors.synopse.transform) transform_synopse_project_to_activity() (in module mex.extractors.synopse.transform) transform_synopse_projects_to_mex_activities() (in module mex.extractors.synopse.transform) transform_synopse_studies_into_access_platforms() (in module mex.extractors.synopse.transform) transform_synopse_variables_belonging_to_same_variable_group_to_mex_variables() (in module mex.extractors.synopse.transform) transform_synopse_variables_to_mex_variable_groups() (in module mex.extractors.synopse.transform) transform_synopse_variables_to_mex_variables() (in module mex.extractors.synopse.transform) transform_voxco_resource_mappings_to_extracted_resources() (in module mex.extractors.voxco.transform) transform_voxco_variable_mappings_to_extracted_variables() (in module mex.extractors.voxco.transform) trennungsgebot (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) Type (mex.extractors.voxco.model.VoxcoVariable attribute) type_ (mex.extractors.blueant.models.source.BlueAntSource attribute) type_json (mex.extractors.sumo.models.cc1_data_model_nokeda.Cc1DataModelNoKeda attribute) type_survey (mex.extractors.odk.model.ODKData attribute) typeId (mex.extractors.blueant.models.project.BlueAntProject attribute)

U

unterthema (mex.extractors.synopse.models.variable.SynopseVariable attribute) updated (mex.extractors.open_data.models.source.OpenDataVersionFiles attribute) url (mex.extractors.blueant.settings.BlueAntSettings attribute) (mex.extractors.confluence_vvt.settings.ConfluenceVvtSettings attribute) (mex.extractors.datscha_web.settings.DatschaWebSettings attribute) (mex.extractors.igs.settings.IGSSettings attribute) (mex.extractors.open_data.settings.OpenDataSettings attribute)

username (mex.extractors.confluence_vvt.settings.ConfluenceVvtSettings attribute)

V

val_col (mex.extractors.biospecimen.settings.BiospecimenSettings attribute) val_instrument (mex.extractors.synopse.models.variable.SynopseVariable attribute) variable_name (mex.extractors.sumo.models.cc1_data_model_nokeda.Cc1DataModelNoKeda attribute) (mex.extractors.sumo.models.cc2_aux_model.Cc2AuxModel attribute) variable_name_column (mex.extractors.sumo.models.cc2_aux_mapping.Cc2AuxMapping attribute) variablenuebersicht_path (mex.extractors.synopse.settings.SynopseSettings attribute) varlabel (mex.extractors.synopse.models.variable.SynopseVariable attribute) varname (mex.extractors.synopse.models.variable.SynopseVariable attribute) verantwortliche_fachabteilung (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) verantwortliche_oe (mex.extractors.synopse.models.project.SynopseProject attribute) verantwortlicher_fuer_das_abrufverfahren (mex.extractors.datscha_web.models.item.DatschaWebItem attribute)

verfuegbarkeitskontrolle (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) version (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) (mex.extractors.synopse.models.study.SynopseStudy attribute) verwandte_publikation_doi (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) verwandte_publikation_titel (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) volume (mex.extractors.endnote.model.EndnoteRecord attribute) vorhandene_anzahl_der_proben (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) vorname (mex.extractors.datscha_web.settings.DatschaWebSettings attribute) voxco (mex.extractors.settings.Settings attribute) VoxcoSettings (class in mex.extractors.voxco.settings) VoxcoVariable (class in mex.extractors.voxco.model)

W

website (mex.extractors.international_projects.models.source.InternationalProjectsSource attribute) weiterfuehrende_dokumentation_titel (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) weiterfuehrende_dokumentation_url_oder_dateipfad (mex.extractors.biospecimen.models.source.BiospecimenResource attribute)

weitergabekontrolle (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) wikidata (mex.extractors.settings.Settings attribute) WikidataSettings (class in mex.extractors.wikidata.settings)

Y

year (mex.extractors.endnote.model.EndnoteRecord attribute)

Z

zeitlicher_bezug (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) zentrale_stelle_fuer_die_verarbeitung (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) zugangsbeschraenkung (mex.extractors.synopse.models.study.SynopseStudy attribute) zugriffsberechtigte (mex.extractors.datscha_web.models.item.DatschaWebItem attribute)

zugriffsbeschraenkung (mex.extractors.biospecimen.models.source.BiospecimenResource attribute) zugriffskontrolle (mex.extractors.datscha_web.models.item.DatschaWebItem attribute) zuwendungs_oder_auftraggeber (mex.extractors.ff_projects.models.source.FFProjectsSource attribute) zweckbestimmung_der_datenverarbeitung (mex.extractors.datscha_web.models.item.DatschaWebItem attribute)